Therapeutic DNP derivatives and methods using same

ABSTRACT

The present invention includes DNP derivatives that are useful for preventing or treating a metabolic disease or disorder in a subject in need thereof. In certain embodiments, the subject is further administered at least one additional therapeutic agent.

CROSS-REFERENCE TO RELATED APPLICATIONS

The present application is a continuation of, and claims priority to,U.S. application Ser. No. 14/914,408, filed Feb. 25, 2016, which is a 35U.S.C. § 371 national phase application from, and claims priority to,International Application No. PCT/US2014/053127, filed Aug. 28, 2014,and published under PCT Article 21(2) in English, which claims priorityunder 35 U.S.C. § 119(e) to U.S. Provisional Application No. 61/872,279,filed Aug. 30, 2013, all of which applications are incorporated hereinby reference in their entireties.

STATEMENT REGARDING FEDERALLY SPONSORED RESEARCH OR DEVELOPMENT

This invention was made with government support under DK085638 andDK040936 awarded by National Institutes of Health. The government hascertain rights in the invention.

BACKGROUND OF THE INVENTION

Non-alcoholic fatty liver disease (NAFLD) is a key factor in thepathogenesis of type 2 diabetes (T2D) and affects one in three Americans(Shulman, 2000, J. Clin. Invest. 106:171-176; Petersen et al., 2005,Diabetes 54:603-608; Samuel & Shulman, 2012, Cell 148:852-857; Boyle etal., 2010, Popul. Health. Metr. 8:29). NAFLD is also a key predisposingfactor for the development of non-alcoholic steatohepatitis (NASH),cirrhosis and hepatocellular carcinoma. Further, NAFLD-induced NASH maysoon surpass hepatitis C and alcoholic cirrhosis as the most commonindication for liver transplantation in the USA (Sanyal et al., 2010,Oncologist 15 Suppl. 4:14-22; Stickel & Hellerbrand, 2010, Gut59:1303-1307; Barry et al., 2010, J. Hepatol. 56:1384-1391; White etal., 2012, Clin. Gastroenterol. Hepatol. 10:1342-1359). Thus, new andeffective therapies for treatment of NAFLD are urgently needed.

One of the best characterized mitochondrial uncoupling agents is2,4-dinitrophenol (DNP), a protonophore that shuttles protons across themitochondrial membrane, dissipating the mitochondrial proton gradientand promoting heat dissipation of the energy derived from mitochondrialsubstrate oxidation. DNP was extensively used as a weight loss remedy inthe 1930s but taken off the market by the U.S. Food and DrugAdministration in 1938 due to the occurrence of fatal hyperthermia(Tainter et al., 1934, Am. J. Public Health Nations Health24:1045-1053).

There is a need in the art for compositions useful for the treatment ofNAFLD and other diseases and disorders. The present invention addressesthis unmet need.

BRIEF SUMMARY OF THE INVENTION

The invention includes a compound of formula (I), or a salt, solvate,N-oxide thereof:

wherein in (I):

R¹, R² and R³ are each independently selected from the group consistingof H, —C₁-C₆ alkyl, —C₃-C₆ cycloalkyl, —C₁-C₆ alkenyl, —C₁-C₆fluoroalkyl, —C₁-C₆ heteroalkyl, —F, —Cl, —Br, —I, —CN, —NO₂, —R⁶, —OR⁶,—SR⁶, —S(═O)R⁶, —S(═O)₂R⁶, —NHS(═O)₂R⁶, —C(═O)R⁶, —OC(═O)R⁶, —C(═O)OR⁶,—OC(═O)OR⁶, —CH(R⁶)₂, —N(R⁶)₂, —C(═O)N(R⁶)₂, —OC(═O)N(R⁶)₂,—NHC(═O)NH(R⁶), —NHC(═O)R⁶, —NHC(═O)OR⁶, —C(OH)(R⁶)₂, —C(NH₂)(R⁶)₂, and—(CH₂)_(m)X², wherein the alkyl, cycloalkyl and alkenyl groups areindependently optionally substituted;

each occurrence of R⁴ is independently selected from the groupconsisting of H, —C₁-C₆ alkyl, —(C₆-C₁₀)aryl, —C₁-C₃ alkyl-(C₆-C₁₀aryl), —C₃-C₆ cycloalkyl, —C₁-C₃ alkyl-(C₃-C₆ cycloalkyl),—(C₅-C₁₀)heteroaryl, —C₁-C₃ alkyl-(C₅-C₁₀ heteroaryl), —C₁-C₆ alkenyl,—C₁-C₆ fluoroalkyl, —C₁-C₆ heteroalkyl, —S(═O)R⁶, —S(═O)₂R⁶,—NHS(═O)₂R⁶, —C(═O)R⁶, —C(═O)OR⁶, —CH(R⁶)₂, —N(R⁶)₂, —C(═O)N(R⁶)₂,—NHC(═O)NH(R⁶), —NHC(═O)R⁶, —NHC(═O)OR⁶, —C(OH)(R⁶)₂, —C(NH₂)(R⁶)₂,—(CH₂)_(n)P(O)(OR⁶)₂,

wherein the alkyl, aryl, cycloalkyl, heteroaryl and alkenyl groups areoptionally substituted;

each occurrence of R⁵ is each independently selected from the groupconsisting of H, —C₁-C₆ alkyl, —C₁-C₃ alkyl-(C₃-C₆ cycloalkyl), —C₁-C₃alkyl-(C₄-C₁₀ heterocyclyl), —C₁-C₃ alkyl-(C₆-C₁₀ aryl), —C₁-C₃alkyl-(C₅-C₁₀ heteroaryl), and —C(═O)R⁶, wherein the alkyl, cycloalkyl,heterocyclyl, aryl, and heteroaryl groups are optionally substituted;

each occurrence of R⁶ is independently selected from the groupconsisting of H and C₁-C₆ alkyl, wherein the alkyl groups are optionallysubstituted;

X¹ is OR⁴, B(OR⁴)₂, or BR⁴(OR⁴);

X² is N(R⁵)₂, SR⁵, or OR⁵;

m is an integer from 1-6; and

n is an integer from 0-6, or any combinations thereof.

The invention further includes a pharmaceutical composition comprising acompound of the invention.

The invention further includes a method of preventing or treating adisease or disorder in a subject in need thereof.

The invention further includes a method of increasing energy expenditurein a subject in need thereof.

In certain embodiments, the method comprises administering to thesubject a therapeutically effective amount of a compound of theinvention.

In certain embodiments, the compound is not 2,4-dinitrophenol,2,4-dinitrophenyl methyl ether, 2,4-dinitrophenyl boronic acid,2,4-dinitrophenyl vinyl ether, 2,4-dinitrophenyl allyl ether,2,4-dinitrophenyl isopropyl ether, 2,4-dinitrophenyl ethyl ether,1-((4-methoxybenzyl)oxy)-2,4-dinitrobenzene, or(2,4-dinitrophenoxy)methyl dihydrogen phosphate.

In certain embodiments, the compound is not 2,4-dinitrophenol.

In certain embodiments, the compound is selected from the groupconsisting of N-(2-hydroxy-3,5-dinitrobenzyl)-4-mercaptobutanamide,2-(1-hydroxypropyl)-4,6-dinitrophenol,4-(2,4-dinitrophenoxy)pentan-2-ol, 3-(2,4-dinitrophenoxy) cyclohexanol,2,4-dinitrophenyl dihydrogen phosphate,3-((4-((2,4-dinitrophenoxy)methyl)phenyl)disulfanyl) propanoic acid,3-((4-((((4-((2,4-dinitrophenoxy)methyl)phenyl)carbamoyl)oxy)methyl)phenyl)disulfanyl)propanoic acid,(R)-4-((3R,5R,7R,8R,9S,10S,12S,13R,14S,17S)-3-(2-(3-((4-((2,4-dinitrophenoxy)methyl)phenyl)disulfanyl)propanamido)ethoxy)-7,12-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoicacid, a salt, solvate, N-oxide thereof, and any combinations thereof.

In certain embodiments, the compound is at least one selected from thegroup consisting of: 2,4-dinitrophenyl methyl ether, 2,4-dinitrophenylboronic acid, 2,4-dinitrophenyl vinyl ether, 2,4-dinitrophenyl allylether, 2,4-dinitrophenyl isopropyl ether, 2,4-dinitrophenyl ethyl ether,1-((4-methoxybenzyl)oxy)-2,4-dinitrobenzene,N-(2-hydroxy-3,5-dinitrobenzyl)-4-mercaptobutanamide,2-(1-hydroxypropyl)-4,6-dinitrophenol,4-(2,4-dinitrophenoxy)pentan-2-ol, 3-(2,4-dinitrophenoxy)cyclohexanol,(2,4-dinitrophenoxy)methyl dihydrogen phosphate, 2,4-dinitrophenyldihydrogen phosphate,3-((4-((2,4-dinitrophenoxy)methyl)phenyl)disulfanyl) propanoic acid,3-((4-((((4-((2,4-dinitrophenoxy)methyl)phenyl)carbamoyl)oxy)methyl)phenyl)disulfanyl)propanoic acid,(R)-4-((3R,5R,7R,8R,9S,10S,12S,13R,14S,17S)-3-(2-(3-((4-((2,4-dinitrophenoxy)methyl)phenyl)disulfanyl)propanamido)ethoxy)-7,12-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoicacid, a salt, solvate, or N-oxide thereof, and any combinations thereof.

In certain embodiments, the composition further comprises at least onepharmaceutically acceptable carrier. In other embodiments, thecomposition further comprises at least one additional therapeutic agent.

In certain embodiments, the disease or disorder is at least one selectedfrom the group consisting of non-alcoholic fatty liver disease (NAFLD),non-alcoholic steatohepatitis (NASH), hepatic steatosis, type 2 diabetes(T2D), acquired lipodystrophy, lipodystrophy (inherited), partiallipodystrophy, hypertriglyceridemia, obesity, metabolic syndrome, Rett'ssyndrome, metabolic syndrome associated with aging, metabolic diseasesassociated with increased reactive oxygen species (ROS), Friedreich'sataxia, and insulin resistance.

In certain embodiments, the subject is afflicted with at least onedisease or disorder selected from the group consisting of non-alcoholicfatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH),hepatic steatosis, type 2 diabetes (T2D), acquired lipodystrophy,lipodystrophy (inherited), partial lipodystrophy, hypertriglyceridemia,obesity, metabolic syndrome, Rett's syndrome, metabolic syndromeassociated with aging, metabolic diseases associated with increasedreactive oxygen species (ROS), Friedreich's ataxia, and insulinresistance.

In certain embodiments, the therapeutically effective amount of thecompound of formula (I) is about 25 μmoles/kg.

In certain embodiments, the subject is further administered at least oneadditional therapeutic agent. In other embodiments, the pharmaceuticalcomposition and the at least one additional therapeutic agent areco-administered to the subject. In yet other embodiments, thepharmaceutical composition and the at least one additional therapeuticagent are co-formulated.

In certain embodiments, the subject is a mammal. In other embodiments,the mammal is human.

BRIEF DESCRIPTION OF THE DRAWINGS

The following detailed description of specific embodiments of theinvention will be better understood when read in conjunction with theappended drawings. For the purpose of illustrating the invention, thereare shown in the drawings specific embodiments. It should be understood,however, that the invention is not limited to the precise arrangementsand instrumentalities of the embodiments shown in the drawings.

FIG. 1, comprising FIGS. 1A-1N, illustrates the safety and efficacyprofile of DNPME compared to DNP. FIG. 1A is a graph illustrating rectaltemperature following IP injection of DNP. FIG. 1B is a graphillustrating rectal temperature following IP injection of DNPME. FIG. 1Cis a graph illustrating survival acutely following treatment with DNP.FIG. 1D is a graph illustrating survival acutely following treatmentwith DNPME. FIG. 1E is a graph illustrating the LD₅₀ of DNP and DNPME.FIG. 1F is a graph illustrating plasma AST after 5 days of dailytreatment with DNPME or vehicle. FIG. 1G is a graph illustrating plasmaALT after 5 days of daily treatment with DNPME or vehicle. FIG. 1H is agraph illustrating plasma BUN after 5 days of daily treatment with DNPMEor vehicle. FIG. 1I is a graph illustrating plasma creatinine after 5days of daily treatment with DNPME or vehicle. FIG. 1J is a graphillustrating liver TAG. FIG. 1K is a graph illustrating ALT after 6weeks of daily treatment in chow-fed rats. FIG. 1L is a graphillustrating AST after 6 weeks of daily treatment in chow-fed rats. FIG.1M is a graph illustrating BUN after 6 weeks of daily treatment inchow-fed rats. FIG. 1N is a graph illustrating creatine after 6 weeks ofdaily treatment in chow-fed rats. Data are represented as mean±S.E.M.n=4-6 per dose.

FIG. 2, comprising FIGS. 2A-2O, illustrates the finding that DNPMEreverses NAFLD, hypertriglyceridemia as well as liver and muscle insulinresistance in fats. FIG. 2A is a graph illustrating fasting plasmaglucose. FIG. 2B is a graph illustrating fasting plasma triglyceride.FIG. 2C is a graph illustrating fasting plasma insulin. FIG. 2D is agraph illustrating basal glucose turnover. FIG. 2E is a graphillustrating plasma glucose during an intraperitoneal glucose tolerancetest. FIG. 2F is a graph illustrating insulin during an intraperitonealglucose tolerance test. For FIGS. 2E-2F: Black circles=vehicle treated,red/gray squares=DNPME treated. *P<0.05, **P<0.01, ***P<0.001. FIG. 2Gis a graph illustrating the glucose infusion rate to maintain euglycemiaduring the hyperinsulinemic-euglycemic clamp. FIG. 2H is a graphillustrating insulin-stimulated glucose metabolism. FIG. 2I is a graphillustrating insulin-mediated suppression of hepatic glucose production.FIG. 2J is a graph illustrating insulin-stimulated glucose uptake inquadriceps. FIG. 2K is a graph illustrating liver TAG. FIG. 2L is agraph illustrating quadriceps TAG. FIG. 2M is a graph illustrating liverVLDL production. FIG. 2N is a graph illustrating the effect of DNPME onliver TCA cycle flux and substrate contributions to the TCA cycle. FIG.2O is a graph illustrating the effect of DNPME on hepatic flux throughpyruvate carboxylase. F or FIGS. 2N-2O: n=3 vehicle treated and 6 DNPMEtreated rats. Rats were fasted overnight (16 hours) prior to each ofthese studies in FIG. 2. Unless otherwise noted, n=5-8 per group forFIG. 2. Data are represented as mean±S.E.M.

FIG. 3, comprising FIGS. 3A-3G, illustrates the finding that DNPMEreverses hyperglycemia, hypertriglyceridemia and hepatic steatosis in arat model of type 2 diabetes and NAFLD. FIG. 3A is a graph illustratingrandom plasma glucose concentrations during DNPME treatment. FIG. 3B isa graph illustrating fasting plasma glucose concentrations. FIG. 3C is agraph illustrating fasting plasma triglyceride concentrations. FIG. 3Dis a graph illustrating plasma glucose concentrations before and duringan intraperitoneal glucose tolerance test. FIG. 3E is a graphillustrating plasma glucose and insulin concentrations before and duringan intraperitoneal glucose tolerance test. FIG. 3F is a graphillustrating liver triglyceride content. FIG. 3G is a graph illustratingquadriceps triglyceride content. n=4-7 per group. Data are representedas mean±S.E.M.

FIG. 4, comprising FIGS. 4A-4I, illustrates plasma and tissue kineticsof DNP and DNPME metabolism in the rat. FIG. 4A is a graph illustratingplasma DNP and DNPME concentration after an intraperitoneal injection ofDNPME (5 mg/kg). FIG. 4B is a graph illustrating liver DNP and DNPMEconcentration after an injection of DNPME (5 mg/kg). For FIGS. 4A-4B:red/dark gray squares=DNPME, blue/light gray circles=DNP. FIG. 4C is agraph illustrating tissue concentration of DNP after an injection ofDNPME (5 mg/kg). FIG. 4D is a graph illustrating tissue concentration ofDNPME after an injection of DNPME (5 mg/kg). FIG. 4E is a graphillustrating tissue concentration of DNP one hour after an injection ofDNP (5 mg/kg). FIG. 4F is a graph illustrating plasma DNP concentrationafter an injection of DNP (25 mg/kg, blue circles) or DNPME (5 mg/kg,red squares). Each time point represents an individual animal. FIG. 4Gis a graph illustrating plasma and tissue concentrations of DNP afterinjection of DNP (25 mg/kg). Tissues were isolated 1 hour after DNPinjection. FIG. 4H is a graph illustrating DNP concentration in tissuesafter 7 days of daily DNPME injections. FIG. 4I is a graph illustratingDNPME concentration in tissues after 7 days of daily DNPME injections.Unless otherwise noted, n=4 per group. Data are expressed as mean±S.E.M

FIG. 5, comprising FIGS. 5A-5K, illustrates the screening ofliver-targeted DNP compounds. FIG. 5A illustrates the structures ofcompounds useful in the invention. FIG. 5B is a graph illustrating basaloxygen consumption rate in plated hepatocytes, then oxygen consumptionrate with addition of the compounds of FIG. 5A at increasing doses. FIG.5C is a graph illustrating ALT in rats treated for 5 days with DNP orvehicle. FIG. 5D is a graph illustrating AST in rats treated for 5 dayswith DNP or vehicle. FIG. 5E is a graph illustrating BUN in rats treatedfor 5 days with DNP or vehicle. FIG. 5F is a graph illustrating creatinein rats treated for 5 days with DNP or vehicle. FIG. 5G is a graphillustrating hepatic TAG in rats treated for 5 days with DNP or vehicle.For FIGS. 5C-5G, *P<0.05, **P<0.01, ***P<0.001. FIG. 5H is a graphillustrating rectal temperature in rats treated for 6 weeks with DNPMEor vehicle (red/light gray squares=DNPME, black circles=vehicle). FIG.5I is a graph illustrating 24 hour urine creatinine clearance in ratstreated for 6 weeks with DNPME or vehicle. FIG. 5J is a representativeimage illustrating liver stained with hematoxylin & eosin. FIG. 5K is arepresentative image illustrating kidney stained with hematoxylin &eosin. Data are mean±SEM.

FIG. 6, comprising FIGS. 6A-6T, illustrates the finding that DNPMEreverses NAFLD and insulin resistance. FIG. 6A is a graph illustratingbody weight at the time of clamp. FIG. 6B is a graph illustrating foodintake before and during injections of DNPME or vehicle. FIG. 6C is agraph illustrating plasma glucose concentrations area under the curveduring an intraperitoneal glucose tolerance test. FIG. 6D is a graphillustrating plasma insulin concentrations area under the curve duringan intraperitoneal glucose tolerance test. FIG. 6E is a graphillustrating plasma glucose during the hyperinsulinemic-euglycemicclamp. FIG. 6F is a graph illustrating plasma insulin concentrations atthe end of the clamp. FIG. 6G is a graph illustrating glucose infusionrate required to maintain euglycemia. For FIGS. 6E and 6G: blackcircles=vehicle treated, red/lgray squares=DNPME treated. FIG. 6H is agraph illustrating liver DAG content. FIG. 6I is a graph illustratingindividual DAG species. FIG. 6J is a graph illustrating quadricepsmuscle DAG. FIG. 6K is a graph illustrating individual DAG species. FIG.6L is a graph illustrating liver PKCε translocation (n=10 per group).FIG. 6M is a graph illustrating quadriceps PKCθ translocation (n=10 pergroup). FIG. 6N is a graph illustrating liver ceramide content. FIG. 6Ois a graph illustrating muscle ceramide content. FIG. 6P is a graphillustrating liver glycogen content. FIG. 6Q is a graph illustratingplasma adiponectin concentration. FIG. 6R is a graph illustrating plasmaFGF-21 concentration. FIG. 6S is a graph illustrating plasmaconcentration of inflammatory markers; n=3 per group. FIG. 6T is a graphillustrating minimal changes in markers of inflammation following DNPMEtreatment. Unless otherwise noted, n=5-8 per group. *P<0.05, **P<0.01.Data are mean±S.E.M.

FIG. 7, comprising FIGS. 7A-7O, illustrates the finding that 14 days ofDNPME treatment reverses hyperglycemia and glucose intolerance in ratmodels of type 2 diabetes (T2D). FIG. 7A is a graph illustrating bodyweight in an intraperitoneal glucose tolerance test. FIG. 7B is a graphillustrating WAT weight in an intraperitoneal glucose tolerance test.FIG. 7C is a graph illustrating insulin area under the curve in anintraperitoneal glucose tolerance test. FIG. 7D is a graph illustratingglucose area under the curve in an intraperitoneal glucose tolerancetest. For FIGS. 7A-7D, rats were treated with low dose streptozotocintreatment and 3-day high fat feeding; n=5-7 per group. FIG. 7E is agraph illustrating liver histology in T2D rats. FIG. 7F is a graphillustrating renal histology in T2D rats. FIG. 7G is a graphillustrating fasting plasma glucose in Zucker Diabetic Fatty rats. FIG.7H is a graph illustrating fasting plasma insulin in Zucker DiabeticFatty rats. FIG. 7I is a graph illustrating triglycerides in ZuckerDiabetic Fatty rats. FIG. 7J is a graph illustrating liver triglyceridesin Zucker Diabetic Fatty rats. FIG. 7K is a graph illustratingquadriceps triglycerides in Zucker Diabetic Fatty rats. FIG. 7L is agraph illustrating plasma ALT in Zucker Diabetic Fatty rats. FIG. 7M isa graph illustrating AST in Zucker Diabetic Fatty rats. FIG. 7N is agraph illustrating BUN in Zucker Diabetic Fatty rats. FIG. 7O is a graphillustrating creatine in Zucker Diabetic Fatty rats. n=6-8 per group.Data are presented as mean±S.E.M.

FIG. 8, comprising FIGS. 8A-8R, illustrates basal metabolism in DNPMEtreated mice and in 5 day DNPME-treated rats in vitro. FIG. 8A is agraph illustrating oxygen consumption. FIG. 8B is a graph illustratingcarbon dioxide production. FIG. 8C is a graph illustrating energyexpenditure throughout the day. FIG. 8D is a graph illustratingrespiratory exchange ratio throughout the day. FIG. 8E is a graphillustrating activity throughout the day. FIG. 8F is a graphillustrating daily caloric intake. For FIGS. 8C-8E: blackcircles=vehicle treated, red/gray squares=DNPME treated. For FIGS.8A-8F, n=8 per group. FIGS. 8G-8K are a series of graphs illustratingoxygen consumption rate in isolated mitochondria obtained from liver(FIG. 8G), brain (FIG. 8H), heart (FIG. 8I), quadriceps (FIG. 8J), andkidney (FIG. 8K) after the addition of varying doses of DNP (blue/lightgray) or DNPME (red/dark gray). Statistics over individual bars refer todifferences from oxygen consumption rate at 0 μM by 2-tailed pairedt-test. If statistics are not listed over certain bars, there was nosignificant difference from 0 μM. In all panels, *P<0.05, **P<0.01. FIG.8L is a graph illustrating liver ATP/AMP. FIG. 8M is a graphillustrating quadriceps ATP/AMP. FIG. 8N is a graph illustrating liverATP/ADP. FIG. 8O is a graph illustrating quadriceps ATP/ADP. FIG. 8P isa graph illustrating liver NADH/NAD⁺. FIG. 8Q is a graph illustratingquadriceps NADH/NAD⁺. FIG. 8R is a graph illustrating liver AMPKphosphorylation relative to total AMPK, and ACC phosphorylation relativeto total ACC. For FIGS. 8G-8R, n=4-7 per group. Data are shown asmean±S.E.M.

FIG. 9 illustrates the ¹H NMR spectrum of DNPME (compound 2) in CDCl₃.

FIG. 10 illustrates the ¹³C NMR spectrum of DNPME (compound 2) in CDCl₃.

FIG. 11 illustrates the 1H NMR spectrum of DNPVE (compound 6) in CDCl₃.

FIG. 12 illustrates the ¹³C NMR spectrum of DNPVE (compound 6) in CDCl₃.

FIG. 13 illustrates the ¹H NMR spectrum of DNPAE (compound 7) in CDCl₃.

FIG. 14 illustrates the ¹³C NMR spectrum of DNPAE (compound 7) in CDCl₃.

FIG. 15 illustrates the ¹H NMR spectrum of DNPIE (compound 8) in CDCl₃.

FIG. 16 illustrates the ¹³C NMR spectrum of DNPIE (compound 8) in CDCl₃.

FIG. 17 illustrates the ¹³C NMR spectrum of DNPME-d₆ (compound 9) inCDCl₃.

FIG. 18 illustrates the structures of exemplary compounds useful in theinvention: 2,4-dinitrophenyl ethyl ether (compound 10),1-((4-methoxybenzyl)oxy)-2,4-dinitrobenzene (MBn-DNP; compound 11),N-(2-hydroxy-3,5-dinitrobenzyl)-4-mercaptobutanamide (MBAM-DNP; compound12), 2-(1-hydroxypropyl)-4,6-dinitrophenol (HP-DNP; compound 13),4-(2,4-dinitrophenoxy)pentan-2-ol (compound 14),3-(2,4-dinitrophenoxy)cyclohexanol (compound 15),(2,4-dinitrophenoxy)methyl dihydrogen phosphate (compound 16), and2,4-dinitrophenyl dihydrogen phosphate (compound 17).

FIG. 19 illustrates the structures of exemplary compounds useful in theinvention: 3-((4-((2,4-dinitrophenoxy)methyl)phenyl)disulfanyl)propanoicacid (compound 18),3-((4-((((4-((2,4-dinitrophenoxy)methyl)phenyl)carbamoyl)oxy)methyl)phenyl)disulfanyl)propanoic acid (compound 19), and(R)-4-((3R,5R,7R,8R,9S,10S,12S,13R,14S,17S)-3-(2-(3-((4-((2,4-dinitrophenoxy)methyl)phenyl)disulfanyl)propanamido)ethoxy)-7,12-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoicacid (compound 20).

FIG. 20 is a graph illustrating the finding that body weight does notdiffer between rats treated with vehicle or with 7 days of DNPMEtreatment.

FIG. 21 is a photograph illustrating visible reductions in visceral fatand hepatic steatosis between rats treated with vehicle and rats treatedwith DNPME.

FIG. 22 is a series of graphs illustrating the finding that treatmentwith DNPME prevents glucose intolerance.

FIG. 23 is a series of graphs illustrating the finding that DNPMEtreatment increases peripheral glucose uptake.

FIG. 24 is a graph illustrating the finding that DNPME treatmentreverses NAFLD in high fat fed rats.

FIG. 25 is a graph illustrating the finding that treatment with DNPMEcorrects basal hepatic glucose production in high fat fed rats.

FIG. 26 is a graph illustrating the finding that DNPME treatmentincreases cardiac glucose uptake in an insulin resistant rodent model ofNAFLD.

FIG. 27 is a table illustrating the LD₅₀ dose/effective dose comparisonof DNPME to acetaminophen.

FIG. 28 is a graph illustrating a kinetics study evaluating plasma DNPand DNPME concentrations after injection of DNPME (5 mg/kg).

FIG. 29 is a series of graphs illustrating DNP and DNPME concentrationin tissues after a single dose of DNPME (5 mg/kg) or DNP (5 mg/kg).

FIG. 30 is a graph illustrating the finding that DNPME treatmentprevents hepatic insulin resistance. Rats were fed high fat diet for twoweeks and were concurrently injected daily with 5 mg/kg of DNPME orvehicle.

FIG. 31 is a graph illustrating the finding that DNPME treatmentprevents peripheral muscle insulin resistance. Rats were fed high fatdiet for two weeks and were concurrently injected daily with 5 mg/kg ofDNPME or vehicle.

FIG. 32 is a graph illustrating the finding that DNPME prevents NAFLD.

FIG. 33 is a graph illustrating the finding that DNPME prevents skeletalmuscle triglyceride accumulation.

DETAILED DESCRIPTION OF THE INVENTION

The present invention relates to the unexpected discovery thatderivatives of 2,4-dinitrophenol (DNP) promote increased mitochondrialactivity, but do not cause hypothermia and other systemic toxicitiesassociated with DNP. In one aspect, the invention provides a novelmethod of treating diseases or disorders in a subject in need thereof.In certain embodiments, the disease or disorder is selected from thegroup consisting of non-alcoholic fatty liver disease (NAFLD),non-alcoholic steatohepatitis (NASH), hepatic steatosis, type 2 diabetes(T2D), acquired lipodystrophy, lipodystrophy (inherited), partiallipodystrophy, hypertriglyceridemia, obesity, metabolic syndrome, Rett'ssyndrome, metabolic syndrome associated with aging, metabolic diseasesassociated with increased reactive oxygen species (ROS), Friedreich'sataxia, and insulin resistance. In other embodiments, the methodcomprises administering to the subject in need thereof a therapeuticallyeffective amount of at least one of the DNP derivatives of theinvention.

Definitions

Unless defined otherwise, all technical and scientific terms used hereinhave the same meaning as commonly understood by one of ordinary skill inthe art to which this invention belongs. Although any methods andmaterials similar or equivalent to those described herein can be used inthe practice or testing of the invention, the preferred methods andmaterials are described.

As used herein, each of the following terms has the meaning associatedwith it in this section.

The articles “a” and “an” are used herein to refer to one or to morethan one (i.e., to at least one) of the grammatical object of thearticle. By way of example, “an element” means one element or more thanone element.

“About” as used herein when referring to a measurable value such as anamount, a temporal duration, and the like, is meant to encompassvariations of ±20% or ±10%, ±5%, ±1%, or ±0.1% from the specified value,as such variations are appropriate to perform the disclosed methods.

The term “abnormal,” when used in the context of organisms, tissues,cells or components thereof, refers to those organisms, tissues, cellsor components thereof that differ in at least one observable ordetectable characteristic (e.g., age, treatment, time of day, and thelike) from those organisms, tissues, cells or components thereof thatdisplay the “normal” (expected) respective characteristic.Characteristics that are normal or expected for one cell or tissue typemight be abnormal for a different cell or tissue type.

A disease or disorder is “alleviated” if the severity of a symptom ofthe disease or disorder, the frequency with which such a symptom isexperienced by a patient, or both, is reduced.

A “disease” is a state of health of an animal wherein the animal cannotmaintain homeostasis, and wherein if the disease is not ameliorated thenthe animal's health continues to deteriorate.

As used herein, the term “composition” or “pharmaceutical composition”refers to a mixture of at least one compound useful within the inventionwith a pharmaceutically acceptable carrier. The pharmaceuticalcomposition facilitates administration of the compound to a patient orsubject. Multiple techniques of administering a compound exist in theart including, but not limited to, nasal, inhalational, topical, oral,aerosol, buccal, sublingual, rectal, pleural, parenteral, peritoneal,vaginal, intramuscular, subcutaneous, transdermal, epidural,intratracheal, otic, intraocular, ophthalmic, intrathecal andintravenous administration.

As used herein, the term “derivative” refers to a small molecule thatdiffers in structure from the reference molecule (i.e., has a distinctstructure from the reference molecule), but retains the essentialproperties of the reference molecule. A derivative may change itsinteraction with certain other molecules relative to the referencemolecule. A derivative molecule may also include a salt, an adduct, orother variant of the reference molecule.

In contrast, a “disorder” in an animal is a state of health in which theanimal is able to maintain homeostasis, but in which the animal's stateof health is less favorable than it would be in the absence of thedisorder. Left untreated, a disorder does not necessarily cause afurther decrease in the animal's state of health.

As used herein, the terms “DNP” and “2,4-DNP” interchangeably refer to2,4-dinitrophenol, a salt, solvate or adduct thereof.

An “effective amount” of a delivery vehicle is that amount sufficient toeffectively bind or deliver a compound.

As used herein, the terms “effective amount,” “pharmaceuticallyeffective amount” and “therapeutically effective amount” refer to anontoxic but sufficient amount of an agent to provide the desiredbiological result. That result may be reduction and/or alleviation ofthe signs, symptoms, or causes of a disease, or any other desiredalteration of a biological system. An appropriate therapeutic amount inany individual case may be determined by one of ordinary skill in theart using routine experimentation.

As used herein, the term “efficacy” refers to the maximal effect(E_(max)) achieved within an assay.

As used herein, the term “metabolic disorder” refers to a conditioncharacterized by an alteration or disturbance in metabolic function.“Metabolic” and “metabolism” are terms well known in the art andgenerally include the whole range of biochemical processes that occurwithin a living organism.

The terms “patient” and “subject” and “individual” are usedinterchangeably herein, and refer to any animal, or cells thereofwhether in vitro or in situ, amenable to the methods described herein.In certain non-limiting embodiments, the patient, subject or individualis a human.

A “therapeutic” treatment is a treatment administered to a subject whoexhibits signs of pathology, for the purpose of diminishing oreliminating those signs.

As used herein, the term “treatment” or “treating” is defined as theapplication or administration of a therapeutic agent, i.e., a compoundof the invention (alone or in combination with another pharmaceuticalagent), to a patient, or application or administration of a therapeuticagent to an isolated tissue or cell line from a patient (e.g., fordiagnosis or ex vivo applications), who has a condition contemplatedherein, a symptom of a condition contemplated herein or the potential todevelop a condition contemplated herein, with the purpose to cure, heal,alleviate, relieve, alter, remedy, ameliorate, improve or affect acondition contemplated herein, the symptoms of a condition contemplatedherein or the potential to develop a condition contemplated herein. Suchtreatments may be specifically tailored or modified, based on knowledgeobtained from the field of pharmacogenomics.

As used herein, the term “pharmaceutically acceptable” refers to amaterial, such as a carrier or diluent, which does not abrogate thebiological activity or properties of the compound, and is relativelynon-toxic, i.e., the material may be administered to an individualwithout causing undesirable biological effects or interacting in adeleterious manner with any of the components of the composition inwhich it is contained.

As used herein, the language “pharmaceutically acceptable salt” refersto a salt of the administered compounds prepared from pharmaceuticallyacceptable non-toxic acids, including inorganic acids, organic acids,solvates, hydrates, or clathrates thereof.

Suitable pharmaceutically acceptable acid addition salts may be preparedfrom an inorganic acid or from an organic acid. Examples of inorganicacids include sulfate, hydrogen sulfate, hydrochloric, hydrobromic,hydriodic, nitric, carbonic, sulfuric, and phosphoric acids (includinghydrogen phosphate and dihydrogen phosphate). Appropriate organic acidsmay be selected from aliphatic, cycloaliphatic, aromatic, araliphatic,heterocyclic, carboxylic and sulfonic classes of organic acids, examplesof which include formic, acetic, propionic, succinic, glycolic,gluconic, lactic, malic, tartaric, citric, ascorbic, glucuronic, maleic,fumaric, pyruvic, aspartic, glutamic, benzoic, anthranilic, 4-hydroxybenzoic, phenylacetic, mandelic, embonic (pamoic), methanesulfonic,ethanesulfonic, benzenesulfonic, pantothenic, trifluoromethanesulfonic,2-hydroxyethanesulfonic, p-toluene sulfonic, sulfanilic,cyclohexylaminosulfonic, stearic, alginic, β-hydroxybutyric, salicylic,galactaric and galacturonic acid.

Suitable pharmaceutically acceptable base addition salts of compounds ofthe invention include, for example, ammonium salts and metallic salts,including alkali metal, alkaline earth metal and transition metal saltssuch as, for example, calcium, magnesium, potassium, sodium and zincsalts. Pharmaceutically acceptable base addition salts also includeorganic salts made from basic amines such as, for example,N,N′-dibenzylethylene-diamine, chloroprocaine, choline, diethanolamine,ethylenediamine, meglumine (N-methylglucamine) and procaine. All ofthese salts may be prepared from the corresponding compound by reacting,for example, the appropriate acid or base with the compound.

As used herein, the term “pharmaceutically acceptable carrier” means apharmaceutically acceptable material, composition or carrier, such as aliquid or solid filler, stabilizer, dispersing agent, suspending agent,diluent, excipient, thickening agent, solvent or encapsulating material,involved in carrying or transporting a compound useful within theinvention within or to the patient such that it may perform its intendedfunction. Typically, such constructs are carried or transported from oneorgan, or portion of the body, to another organ, or portion of the body.Each carrier must be “acceptable” in the sense of being compatible withthe other ingredients of the formulation, including the compound usefulwithin the invention, and not injurious to the patient. Some examples ofmaterials that may serve as pharmaceutically acceptable carriersinclude: sugars, such as lactose, glucose and sucrose; starches, such ascorn starch and potato starch; cellulose, and its derivatives, such assodium carboxymethyl cellulose, ethyl cellulose and cellulose acetate;powdered tragacanth; malt; gelatin; talc; excipients, such as cocoabutter and suppository waxes; oils, such as peanut oil, cottonseed oil,safflower oil, sesame oil, olive oil, corn oil and soybean oil; glycols,such as propylene glycol; polyols, such as glycerin, sorbitol, mannitoland polyethylene glycol; esters, such as ethyl oleate and ethyl laurate;agar; buffering agents, such as magnesium hydroxide and aluminumhydroxide; surface active agents; alginic acid; pyrogen-free water;isotonic saline; Ringer's solution; ethyl alcohol; phosphate buffersolutions; and other non-toxic compatible substances employed inpharmaceutical formulations. As used herein, “pharmaceuticallyacceptable carrier” also includes any and all coatings, antibacterialand antifungal agents, and absorption delaying agents, and the like thatare compatible with the activity of the compound useful within theinvention, and are physiologically acceptable to the patient.Supplementary active compounds may also be incorporated into thecompositions. The “pharmaceutically acceptable carrier” may furtherinclude a pharmaceutically acceptable salt of the compound useful withinthe invention. Other additional ingredients that may be included in thepharmaceutical compositions used in the practice of the invention areknown in the art and described, for example in Remington'sPharmaceutical Sciences (Genaro, Ed., Mack Publishing Co., 1985, Easton,Pa.), which is incorporated herein by reference.

As used herein, the term “potency” refers to the dose needed to producehalf the maximal response (ED₅₀).

As used herein, the term “alkyl,” by itself or as part of anothersubstituent means, unless otherwise stated, a straight or branched chainhydrocarbon having the number of carbon atoms designated (i.e. C₁₋₆means one to six carbon atoms) and including straight, branched chain,or cyclic substituent groups. Examples include methyl, ethyl, propyl,isopropyl, butyl, isobutyl, tert-butyl, pentyl, neopentyl, hexyl, andcyclopropylmethyl. Most preferred is (C₁-C₆)alkyl, particularly ethyl,methyl, isopropyl, isobutyl, n-pentyl, n-hexyl and cyclopropylmethyl.

As used herein, the term “substituted alkyl” means alkyl as definedabove, substituted by one, two or three substituents selected from thegroup consisting of halogen, —OH, alkoxy, —NH₂, —N(CH₃)₂, —C(═O)OH,trifluoromethyl, —C≡N, —C(═O)O(C₁-C₄)alkyl, —C(═O)NH₂, —SO₂NH₂,—C(═NH)NH₂, and —NO₂, preferably containing one or two substituentsselected from halogen, —OH, alkoxy, —NH₂, trifluoromethyl, —N(CH₃)₂, and—C(═O)OH, more preferably selected from halogen, alkoxy and —OH.Examples of substituted alkyls include, but are not limited to,2,2-difluoropropyl, 2-carboxycyclopentyl and 3-chloropropyl.

As used herein, the term “heteroalkyl” by itself or in combination withanother term means, unless otherwise stated, a stable straight orbranched chain alkyl group consisting of the stated number of carbonatoms and one or two heteroatoms selected from the group consisting ofO, N, and S, and wherein the nitrogen and sulfur atoms may be optionallyoxidized and the nitrogen heteroatom may be optionally quaternized. Theheteroatom(s) may be placed at any position of the heteroalkyl group,including between the rest of the heteroalkyl group and the fragment towhich it is attached, as well as attached to the most distal carbon atomin the heteroalkyl group. Examples include: —O—CH₂—CH₂—CH₃,—CH₂—CH₂—CH₂—OH, —CH₂—CH₂—NH—CH₃, —CH₂—S—CH₂—CH₃, and —CH₂CH₂—S(═O)—CH₃.Up to two heteroatoms may be consecutive, such as, for example,—CH₂—NH—OCH₃, or —CH₂—CH₂—SS—CH₃

As used herein, the term “alkoxy” employed alone or in combination withother terms means, unless otherwise stated, an alkyl group having thedesignated number of carbon atoms, as defined above, connected to therest of the molecule via an oxygen atom, such as, for example, methoxy,ethoxy, 1-propoxy, 2-propoxy (isopropoxy) and the higher homologs andisomers. Preferred are (C₁-C₃) alkoxy, particularly ethoxy and methoxy.

As used herein, the term “halo” or “halogen” alone or as part of anothersubstituent means, unless otherwise stated, a fluorine, chlorine,bromine, or iodine atom, preferably, fluorine, chlorine, or bromine,more preferably, fluorine or chlorine.

As used herein, the term “cycloalkyl” refers to a mono cyclic orpolycyclic non-aromatic radical, wherein each of the atoms forming thering (i.e. skeletal atoms) is a carbon atom. In certain embodiments, thecycloalkyl group is saturated or partially unsaturated. In otherembodiments, the cycloalkyl group is fused with an aromatic ring.Cycloalkyl groups include groups having from 3 to 10 ring atoms.Illustrative examples of cycloalkyl groups include, but are not limi-tedto, the following moieties:

Monocyclic cycloalkyls include, but are not limited to, cyclopropyl,cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, and cyclooctyl.Dicyclic cycloalkyls include, but are not limited to,tetrahydronaphthyl, indanyl, and tetrahydropentalene. Polycycliccycloalkyls include adamantine and norbornane. The term cycloalkylincludes “unsaturated nonaromatic carbocyclyl” or “nonaromaticunsaturated carbocyclyl” groups, both of which refer to a nonaromaticcarbocycle as defined herein, which contains at least one carbon carbondouble bond or one carbon carbon triple bond.

As used herein, the term “heterocycloalkyl” or “heterocyclyl” refers toa heteroalicyclic group containing one to four ring heteroatoms eachselected from O, S and N. In certain embodiments, each heterocycloalkylgroup has from 4 to 10 atoms in its ring system, with the proviso thatthe ring of said group does not contain two adjacent O or S atoms. Inother embodiments, the heterocycloalkyl group is fused with an aromaticring. In certain embodiments, the nitrogen and sulfur heteroatoms may beoptionally oxidized, and the nitrogen atom may be optionallyquaternized. The heterocyclic system may be attached, unless otherwisestated, at any heteroatom or carbon atom that affords a stablestructure. A heterocycle may be aromatic or non-aromatic in nature. Incertain embodiments, the heterocycle is a heteroaryl.

An example of a 3-membered heterocycloalkyl group includes, and is notlimited to, aziridine. Examples of 4-membered heterocycloalkyl groupsinclude, and are not limited to, azetidine and a beta lactam. Examplesof 5-membered heterocycloalkyl groups include, and are not limited to,pyrrolidine, oxazolidine and thiazolidinedione. Examples of 6-memberedheterocycloalkyl groups include, and are not limited to, piperidine,morpholine and piperazine. Other non-limiting examples ofheterocycloalkyl groups are:

Examples of non-aromatic heterocycles include monocyclic groups such asaziridine, oxirane, thiirane, azetidine, oxetane, thietane, pyrrolidine,pyrroline, pyrazolidine, imidazoline, dioxolane, sulfolane,2,3-dihydrofuran, 2,5-dihydrofuran, tetrahydrofuran, thiophane,piperidine, 1,2,3,6-tetrahydropyridine, 1,4-dihydropyridine, piperazine,morpholine, thiomorpholine, pyran, 2,3-dihydropyran, tetrahydropyran,1,4-dioxane, 1,3-dioxane, homopiperazine, homopiperidine, 1,3-dioxepane,4,7-dihydro-1,3-dioxepin, and hexamethyleneoxide.

As used herein, the term “aromatic” refers to a carbocycle orheterocycle with one or more polyunsaturated rings and having aromaticcharacter, i.e. having (4n+2) delocalized π(pi) electrons, where n is aninteger.

As used herein, the term “aryl,” employed alone or in combination withother terms, means, unless otherwise stated, a carbocyclic aromaticsystem containing one or more rings (typically one, two or three rings),wherein such rings may be attached together in a pendent manner, such asa biphenyl, or may be fused, such as naphthalene. Examples of arylgroups include phenyl, anthracyl, and naphthyl. Preferred examples arephenyl and naphthyl, most preferred is phenyl.

As used herein, the term “aryl-(C₁-C₃)alkyl” means a functional groupwherein a one- to three-carbon alkylene chain is attached to an arylgroup, e.g., —CH₂CH₂-phenyl. Preferred is aryl-CH₂— and aryl-CH(CH₃)—.The term “substituted aryl-(C₁-C₃)alkyl” means an aryl-(C₁-C₃)alkylfunctional group in which the aryl group is substituted. Preferred issubstituted aryl(CH₂)—. Similarly, the term “heteroaryl-(C₁-C₃)alkyl”means a functional group wherein a one to three carbon alkylene chain isattached to a heteroaryl group, e.g., —CH₂CH₂-pyridyl. Preferred isheteroaryl-(CH₂)—. The term “substituted heteroaryl-(C₁-C₃)alkyl” meansa heteroaryl-(C₁-C₃)alkyl functional group in which the heteroaryl groupis substituted. Preferred is substituted heteroaryl-(CH₂)—.

As used herein, the term “heteroaryl” or “heteroaromatic” refers to aheterocycle having aromatic character. A polycyclic heteroaryl mayinclude one or more rings that are partially saturated. Examples includethe following

moieties:

Examples of heteroaryl groups also include pyridyl, pyrazinyl,pyrimidinyl (particularly 2- and 4-pyrimidinyl), pyridazinyl, thienyl,furyl, pyrrolyl (particularly 2-pyrrolyl), imidazolyl, thiazolyl,oxazolyl, pyrazolyl (particularly 3- and 5-pyrazolyl), isothiazolyl,1,2,3-triazolyl, 1,2,4-triazolyl, 1,3,4-triazolyl, tetrazolyl,1,2,3-thiadiazolyl, 1,2,3-oxadiazolyl, 1,3,4-thiadiazolyl and1,3,4-oxadiazolyl.

Examples of polycyclic heterocycles and heteroaryls include indolyl(particularly 3-, 4-, 5-, 6- and 7-indolyl), indolinyl, quinolyl,tetrahydroquinolyl, isoquinolyl (particularly 1- and 5-isoquinolyl),1,2,3,4-tetrahydroisoquinolyl, cinnolinyl, quinoxalinyl (particularly 2-and 5-quinoxalinyl), quinazolinyl, phthalazinyl, 1,8-naphthyridinyl,1,4-benzodioxanyl, coumarin, dihydrocoumarin, 1,5-naphthyridinyl,benzofuryl (particularly 3-, 4-, 5-, 6- and 7-benzofuryl),2,3-dihydrobenzofuryl, 1,2-benzisoxazolyl, benzothienyl (particularly3-, 4-, 5-, 6-, and 7-benzothienyl), benzoxazolyl, benzothiazolyl(particularly 2-benzothiazolyl and 5-benzothiazolyl), purinyl,benzimidazolyl (particularly 2-benzimidazolyl), benzotriazolyl,thioxanthinyl, carbazolyl, carbolinyl, acridinyl, pyrrolizidinyl, andquinolizidinyl.

As used herein, the term “substituted” means that an atom or group ofatoms has replaced hydrogen as the substituent attached to anothergroup. The term “substituted” further refers to any level ofsubstitution, namely mono-, di-, tri-, tetra-, or penta-substitution,where such substitution is permitted. The substituents are independentlyselected, and substitution may be at any chemically accessible position.In certain embodiments, the substituents vary in number between one andfour. In other embodiments, the substituents vary in number between oneand three. In yet other embodiments, the substituents vary in numberbetween one and two.

As used herein, the term “optionally substituted” means that thereferenced group may be substituted or unsubstituted. In certainembodiments, the referenced group is optionally substituted with zerosubstituents, i.e., the referenced group is unsubstituted. In otherembodiments, the referenced group is optionally substituted with one ormore additional group(s) individually and independently selected fromgroups described herein.

In certain embodiments, the substituents are independently selected fromthe group consisting of oxo, halogen, —CN, —NH₂, —OH, —NH(CH₃),—N(CH₃)₂, alkyl (including straight chain, branched and/or unsaturatedalkyl), substituted or unsubstituted cycloalkyl, substituted orunsubstituted heterocycloalkyl, fluoro alkyl, substituted orunsubstituted heteroalkyl, substituted or unsubstituted alkoxy,fluoroalkoxy, —S-alkyl, S(═O)₂alkyl, —C(═O)NH[substituted orunsubstituted alkyl, or substituted or unsubstituted phenyl], —C(═O)N[Hor alkyl]₂, —OC(═O)N[substituted or unsubstituted alkyl]₂,—NHC(═O)NH[substituted or unsubstituted alkyl, or substituted orunsubstituted phenyl], —NHC(═O)alkyl, —N[substituted or unsubstitutedalkyl]C(═O)[substituted or unsubstituted alkyl], —NHC(═O)[substituted orunsubstituted alkyl], —C(OH)[substituted or unsubstituted alkyl]₂, and—C(NH₂)[substituted or unsubstituted alkyl]₂. In other embodiments, byway of example, an optional substituent is selected from oxo, fluorine,chlorine, bromine, iodine, —CN, —NH₂, —OH, —SH, —NH(CH₃), —N(CH₃)₂,—CH₃, —CH₂CH₃, —CH(CH₃)₂, —CF₃, —CH₂CF₃, —OCH₃, —OCH₂CH₃, —OCH(CH₃)₂,—OCF₃, —OCH₂CF₃, —S(═O)₂—CH₃, —C(═O)NH₂, —C(═O)—NHCH₃, —NHC(═O)NHCH₃,—C(═O)CH₃, and —C(═O)OH. In yet other embodiments, the substituents areindependently selected from the group consisting of C₁₋₆ alkyl, —OH,C₁₋₆ alkoxy, halo, amino, acetamido, oxo and nitro. In yet otherembodiments, the substituents are independently selected from the groupconsisting of C₁₋₆ alkyl, C₁₋₆ alkoxy, halo, acetamido, and nitro. Asused herein, where a substituent is an alkyl or alkoxy group, the carbonchain may be branched, straight or cyclic, with straight beingpreferred.

Ranges: throughout this disclosure, various aspects of the invention canbe presented in a range format. It should be understood that thedescription in range format is merely for convenience and brevity andshould not be construed as an inflexible limitation on the scope of theinvention. Accordingly, the description of a range should be consideredto have specifically disclosed all the possible sub-ranges as well asindividual numerical values within that range. For example, descriptionof a range such as from 1 to 6 should be considered to have specificallydisclosed sub-ranges such as from 1 to 3, from 1 to 4, from 1 to 5, from2 to 4, from 2 to 6, from 3 to 6 etc., as well as individual numberswithin that range, for example, 1, 2, 2.7, 3, 4, 5, 5.3, and 6. Thisapplies regardless of the breadth of the range.

Description

The present invention relates to the unexpected discovery thatderivatives of 2,4-dinitrophenol (DNP) promote increased mitochondrialactivity, but do not cause hypothermia and other systemic toxicitiesassociated with DNP.

The compounds related to DNP derivatives of the invention may be used totreat a disease or disorder such as, but not limited to, non-alcoholicfatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH),hepatic steatosis, type 2 diabetes (T2D), acquired lipodystrophy,lipodystrophy (inherited), partial lipodystrophy, hypertriglyceridemia,obesity, metabolic syndrome, Rett's syndrome, metabolic syndromeassociated with aging, metabolic diseases associated with increasedreactive oxygen species (ROS), Friedreich's ataxia, and/or insulinresistance.

In one aspect, the present invention relates to the discovery thatadministering a liver-targeting mitochondrial uncoupling agent, such asa compound of the invention, to a subject promotes increased energyexpenditure in a safe and tolerable manner. There are currently no drugsthat promote increased energy expenditure in a safe and tolerablemanner. Thus, the compounds of the invention represent a safe and novelclass of agents for the treatment of mitochondrial-related diseasesand/or disorders.

In one aspect, the present invention provides compounds, andcompositions comprising the same, that target the liver. In anotheraspect, hyperthermia and related toxicities of DNP are on-target effectsrelated to systemic mitochondrial uncoupling, and thus a compound of theinvention targeting the liver is an effective and safe approach for thetreatment of diseases and disorders because the compound promotes themetabolism of hepatic triglyceride, while avoiding hyperthermia andassociated systemic toxicities that typically occur with mitochondrialuncoupling agents.

Diseases or Disorders

The methods, compounds and compositions of the invention are useful fortreating and/or preventing a variety of diseases or disorders. Incertain embodiments, the disease or disorder is a metabolic disease ordisorder. Non-limiting examples of metabolic diseases or disordersinclude, but are not limited to, hyperglycemia, prediabetes, diabetes(type I and type 2), obesity, NAFLD, insulin resistance, Type 2 Diabetes(T2D), metabolic syndrome and dyslipidemia related to metabolicconditions.

In certain embodiments, the compounds, compositions and methods of theinvention may be used to treat or prevent a disease or disorder such as,but not limited to, NAFLD, non-alcoholic steatohepatitis (NASH), hepaticsteatosis, acquired lipodystrophy, inherited lipodystrophy, partiallipodystrophy, insulin resistance, Type 2 Diabetes (T2D), obesity,hypertriglyceridemia, metabolic syndrome, metabolic syndrome associatedwith aging, metabolic diseases associated with increased reactive oxygenspecies (ROS), Friedreich's ataxia, diseases in which free radicalmediated oxidative injury leads to tissue degeneration, and/or diseasesin which cells inappropriately undergo apoptosis, and include thetreatment of a wide number of diseases, including but not limited toauto-immune disease, congenital muscular dystrophy, fatal infantilemyopathy, “later-onset” myopathy, MELAS (mitochondrial encephalopathy,lactic acidosis, and stroke), MIDD (mitochondrial diabetes anddeafness), MERRF (myoclonic epilepsy ragged red fiber syndrome),arthritis, NARP (Neuropathy; Ataxia; Retinitis Pigmentosa), MNGIE(Myopathy and external ophthalmoplegia; Neuropathy; Gastro-Intestinal;Encephalopathy), LHON (Leber's; Hereditary; Optic; Neuropathy),Kearns-Sayre disease, Pearson's Syndrome, PEO (Progressive ExternalOphthalmoplegia), Wolfram syndrome, DIDMOAD (Diabetes Insipidus,Diabetes Mellitus, Optic Atrophy, Deafness), ADPD (Alzheimer's disease;Parkinson's disease), AMFD (ataxia, myoclonus and deafness), CIPO(chronic intestinal pseudoobstruction; myopathy; opthalmoplegia), CPEO(chronic progressive external opthalmoplegia), maternally inheriteddeafness, aminoglycoside-induced deafness, DEMCHO (dementia; chorea),DMDF (diabetes mellitus; deafness), exercise intolerance, ESOC(epilepsy; strokes; optic atrophy; congenitive decline), FBSN (familialbilateral striatal necrosis), FICP (fatal infantile cardiomyopathy plusa MELAS-associated cardiomyopathy), GER (gastrointestinal reflux), LIMM(lethal infantile mitochondrial myopathy), LDYT (Leber's hereditaryoptic neuropathy and DYsTonia), MDM (myopathy; diabetes mellitus), MEPR(myoclonic epilepsy; psychomotor regression), MERME (MERRF/MELAS overlapdisease), MHCM (maternally inherited hypertrophic cardiomyopathy), MICM(maternally inherited cardiomyopathy), MILS (maternally inherited Leighsyndrome), mitochondrial encephalocardiomyopathy, mitochondrialencephalomyopathy, mitochondrial myopathy, MMC (maternal myopathy;cardio myopathy), multisystem mitochondrial disorder (myopathy;encephalopathy; blindness; hearing loss; peripheral neuropathy), NIDDM(non-insulin dependent diabetes mellitus), PEM (progressiveencephalopathy), PME (progressive myclonus epilepsy), Rett's syndrome,SIDS (sudden infant death syndrome, SNHL (sensorineural hearing loss),Leigh's Syndrome, dystonia, schizophrenia, and/or psoriasis.

In certain embodiments, the disease or disorder comprises NAFLD. Inother embodiments, the disease or disorder comprises non-alcoholicsteatohepatitis (NASH). In yet other embodiments, the disease ordisorder comprises hepatic steatosis. In yet other embodiments, thedisease or disorder comprises Type 2 Diabetes. In yet other embodiments,the disease or disorder comprises acquired lipodystrophy. In yet otherembodiments, the disease or disorder comprises inherited lipodystrophy.In yet other embodiments, the disease or disorder comprises partiallipodystrophy. In yet other embodiments, the disease or disordercomprises hypertriglyceridemia. In yet other embodiments, the disease ordisorder comprises obesity. In yet other embodiments, the disease ordisorder comprises metabolic syndrome. In yet other embodiments, thedisease or disorder comprises insulin resistance. In yet otherembodiments, the disease or disorder comprises Rett's syndrome. In yetother embodiments, the disease or disorder comprises metabolic syndromeassociated with aging. In yet other embodiments, the disease or disordercomprises metabolic diseases associated with increased reactive oxygenspecies (ROS). In yet other embodiments, the disease or disordercomprises Friedreich's ataxia.

Compounds

The compounds of the invention may be synthesized using techniquesdisclosed herein as well as techniques well-known in the art of organicsynthesis. The starting materials and intermediates required for thesynthesis may be obtained from commercial sources or synthesizedaccording to methods known to those skilled in the art.

In one aspect, the compound of the invention is a targetingmitochondrial uncoupling agent. In certain embodiments, the compound isa liver-targeting mitochondrial uncoupling agent. In other embodiments,the compounds of the invention represent a safe and novel class ofagents for the treatment of mitochondrial-related diseases and disordersbecause the compounds are not systemically toxic.

In one aspect, the compound of the invention is a compound of formula(I), or a salt, solvate, or N-oxide thereof:

wherein in (I):

R¹, R² and R³ are each independently selected from the group consistingof H, —C₁-C₆ alkyl, —C₃-C₆ cycloalkyl, —C₁-C₆ alkenyl, —C₁-C₆fluoroalkyl, —C₁-C₆ heteroalkyl, —F, —Cl, —Br, —I, —CN, —NO₂, —R⁶, —OR⁶,—SR⁶, —S(═O)R⁶, —S(═O)₂R⁶, —NHS(═O)₂R⁶, —C(═O)R⁶, —OC(═O)R⁶, —C(═O)OR⁶,—OC(═O)OR⁶, —CH(R⁶)₂, —N(R⁶)₂, —C(═O)N(R⁶)₂, —OC(═O)N(R⁶)₂,—NHC(═O)NH(R⁶), —NHC(═O)R⁶, —NHC(═O)OR⁶, —C(OH)(R⁶)₂, —C(NH₂)(R⁶)₂, and—(CH₂)_(m)X², wherein the alkyl, cycloalkyl and alkenyl groups areindependently optionally substituted;

each occurrence of R⁴ is independently selected from the groupconsisting of H, —C₁-C₆ alkyl, —(C₆-C₁₀)aryl, —C₁-C₃ alkyl-(C₆-C₁₀aryl), —C₃-C₆ cycloalkyl, —C₁-C₃ alkyl-(C₃-C₆ cycloalkyl),—(C₅-C₁₀)heteroaryl, —C₁-C₃ alkyl-(C₅-C₁₀ heteroaryl), —C₁-C₆ alkenyl,—C₁-C₆ fluoroalkyl, —C₁-C₆ heteroalkyl, —R⁶, —S(═O)R⁶, —S(═O)₂R⁶,—NHS(═O)₂R⁶, —C(═O)R⁶, —C(═O)OR⁶, —CH(R⁶)₂, —N(R⁶)₂, —C(═O)N(R⁶)₂,—NHC(═O)NH(R⁶), —NHC(═O)R⁶, —NHC(═O)OR⁶, —C(OH)(R⁶)₂, —C(NH₂)(R⁶)₂,—(CH₂)_(n)P(O)(OR⁶)₂,

wherein the alkyl, aryl, cycloalkyl, heteroaryl and alkenyl groups areoptionally substituted;

each occurrence of R⁵ is each independently selected from the groupconsisting of H, —C₁-C₆ alkyl, —C₁-C₃ alkyl-(C₃-C₆ cycloalkyl), —C₁-C₃alkyl-(C₄-C₁₀ heterocyclyl), —C₁-C₃ alkyl-(C₆-C₁₀ aryl), —C₁-C₃alkyl-(C₅-C₁₀ heteroaryl), and —C(═O)R⁶, wherein the alkyl, cycloalkyl,heterocyclyl, aryl, and heteroaryl groups are optionally substituted;

each occurrence of R⁶ is independently selected from the groupconsisting of H and C₁-C₆ alkyl, wherein the alkyl groups are optionallysubstituted;

X¹ is OR⁴, B(OR⁴)₂, or BR⁴(OR⁴);

X² is N(R⁵)₂, SR⁵, or OR⁵;

m is an integer from 1-6; and

n is an integer from 0-6,

with the proviso that the compound is not 2,4-dinitrophenol.

In certain embodiments, the compound of the invention is selected fromthe group consisting of: 2,4-dinitrophenyl methyl ether,2,4-dinitrophenyl boronic acid, 2,4-dinitrophenyl vinyl ether,2,4-dinitrophenyl allyl ether, 2,4-dinitrophenyl isopropyl ether,2,4-dinitrophenyl ethyl ether,1-((4-methoxybenzyl)oxy)-2,4-dinitrobenzene,N-(2-hydroxy-3,5-dinitrobenzyl)-4-mercaptobutanamide,2-(1-hydroxypropyl)-4,6-dinitrophenol,4-(2,4-dinitrophenoxy)pentan-2-ol, 3-(2,4-dinitrophenoxy)cyclohexanol,(2,4-dinitrophenoxy)methyl dihydrogen phosphate, 2,4-dinitrophenyldihydrogen phosphate,3-((4-((2,4-dinitrophenoxy)methyl)phenyl)disulfanyl) propanoic acid,3-((4-((((4-((2,4-dinitrophenoxy)methyl)phenyl)carbamoyl)oxy)methyl)phenyl)disulfanyl)propanoic acid,(R)-4-((3R,5R,7R,8R,9S,10S,12S,13R,14S,17S)-3-(2-(3-((4-((2,4-dinitrophenoxy)methyl)phenyl)disulfanyl)propanamido)ethoxy)-7,12-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoicacid, a salt, solvate, or N-oxide thereof, and any combinations thereof.

The present invention also contemplates phosphate ester anddioxaphosphorinane prodrugs. For general examples of phosphate esterprodrugs, see Heimbach et al., 2003, Int. J. Pharm. 261:81-92, which isincorporated herein by reference in its entirety. For examples ofanti-HIV molecules, see Nowicka-Sans et al., 2012, Antimicrob. AgentsChemother. 56:3498-3507 and Kadow et al., 2012, J. Med. Chem.55:2048-2056, each of which is incorporated herein by reference in itsentirety. The anti-HIV prodrugs are thought to be cleaved by alkalinephosphatase (ALP) located on the luminal surface of the mall intestine.ALPs are present throughout the body (especially in the intestine), sopremature cleavage of DNP after the intestinal absorption may beproblematic. For examples of phosphate ester and dioxaphosphorinaneprodrugs, see Erion et al., 2005, J. Pharmacol. Exp. Ther. 312:554-560,which is incorporated herein by reference in its entirety.

In certain embodiments, the compound of the invention is a targetedmitochondrial uncoupling agent. In yet other embodiments, the compoundof the invention is a compound of formula (I). In yet other embodiments,the compound of the invention is a DNP derivative.

In one aspect, the present invention includes compositions comprising atleast one compound of the invention. In other embodiments, the compoundof the invention is a compound of formula (I). In yet other embodiments,the compound of the invention is a DNP derivative. The present inventionalso includes a composition comprising at least one compound of theinvention, wherein the composition optionally further comprise at leastone additional therapeutic agent. The invention also includes apharmaceutical composition comprising at least one compound of theinvention and at least one pharmaceutically acceptable carrier.

Synthesis

Compounds of formula (I) may be prepared by the general schemesdescribed herein, using the synthetic method known by those skilled inthe art. The following examples illustrate non-limiting embodiments ofthe invention.

The compounds of the invention may possess one or more stereocenters,and each stereocenter may exist independently in either the (R) or (S)configuration. In certain embodiments, compounds described herein arepresent in optically active or racemic forms. It is to be understoodthat the compounds described herein encompass racemic, optically-active,regioisomeric and stereoisomeric forms, or combinations thereof thatpossess the therapeutically useful properties described herein.Preparation of optically active forms is achieved in any suitablemanner, including by way of non-limiting example, by resolution of theracemic form with recrystallization techniques, synthesis fromoptically-active starting materials, chiral synthesis, orchromatographic separation using a chiral stationary phase. In certainembodiments, a mixture of one or more isomer is utilized as thetherapeutic compound described herein. In other embodiments, compoundsdescribed herein contain one or more chiral centers. These compounds areprepared by any means, including stereoselective synthesis,enantioselective synthesis and/or separation of a mixture of enantiomersand/or diastereomers. Resolution of compounds and isomers thereof isachieved by any means including, by way of non-limiting example,chemical processes, enzymatic processes, fractional crystallization,distillation, and chromatography.

The methods and formulations described herein include the use ofN-oxides (if appropriate), crystalline forms (also known as polymorphs),solvates, amorphous phases, and/or pharmaceutically acceptable salts ofcompounds having the structure of any compound of the invention, as wellas metabolites and active metabolites of these compounds having the sametype of activity. Solvates include water, ether (e.g., tetrahydrofuran,methyl tert-butyl ether) or alcohol (e.g., ethanol) solvates, acetatesand the like. In certain embodiments, the compounds described hereinexist in solvated forms with pharmaceutically acceptable solvents suchas water, and ethanol. In other embodiments, the compounds describedherein exist in unsolvated form.

In certain embodiments, the compounds of the invention may exist astautomers. All tautomers are included within the scope of the compoundspresented herein.

In certain embodiments, compounds described herein are prepared asprodrugs. A “prodrug” refers to an agent that is converted into theparent drug in vivo. In certain embodiments, upon in vivoadministration, a prodrug is chemically converted to the biologically,pharmaceutically or therapeutically active form of the compound. Inother embodiments, a prodrug is enzymatically metabolized by one or moresteps or processes to the biologically, pharmaceutically ortherapeutically active form of the compound.

In certain embodiments, sites on, for example, the aromatic ring portionof compounds of the invention are susceptible to various metabolicreactions. Incorporation of appropriate substituents on the aromaticring structures may reduce, minimize or eliminate this metabolicpathway. In certain embodiments, the appropriate substituent to decreaseor eliminate the susceptibility of the aromatic ring to metabolicreactions is, by way of example only, a deuterium, a halogen, or analkyl group.

Compounds described herein also include isotopically-labeled compoundswherein one or more atoms is replaced by an atom having the same atomicnumber, but an atomic mass or mass number different from the atomic massor mass number usually found in nature. Examples of isotopes suitablefor inclusion in the compounds described herein include and are notlimited to ²H, ³H, ¹¹C, ¹³C, ¹⁴C, ³⁶Cl, ¹⁸F, ¹²³I, ¹²⁵I, ¹³N, ¹⁵N, ¹⁵O,¹⁷O, ¹⁸O, ³²P, and ³⁵S. In certain embodiments, isotopically-labeledcompounds are useful in drug and/or substrate tissue distributionstudies. In other embodiments, substitution with heavier isotopes suchas deuterium affords greater metabolic stability (for example, increasedin vivo half-life or reduced dosage requirements). In yet otherembodiments, substitution with positron emitting isotopes, such as ¹¹C,¹⁸F, ¹⁵O and ¹³N, is useful in Positron Emission Topography (PET)studies for examining substrate receptor occupancy. Isotopically-labeledcompounds are prepared by any suitable method or by processes using anappropriate isotopically-labeled reagent in place of the non-labeledreagent otherwise employed.

In certain embodiments, the compounds described herein are labeled byother means, including, but not limited to, the use of chromophores orfluorescent moieties, bioluminescent labels, or chemiluminescent labels.

The compounds described herein, and other related compounds havingdifferent substituents are synthesized using techniques and materialsdescribed herein and as described, for example, in Fieser & Fieser'sReagents for Organic Synthesis, Volumes 1-17 (John Wiley and Sons,1991); Rodd's Chemistry of Carbon Compounds, Volumes 1-5 andSupplementals (Elsevier Science Publishers, 1989); Organic Reactions,Volumes 1-40 (John Wiley and Sons, 1991), Larock's Comprehensive OrganicTransformations (VCH Publishers Inc., 1989), March, Advanced OrganicChemistry 4^(th) Ed., (Wiley 1992); Carey & Sundberg, Advanced OrganicChemistry 4th Ed., Vols. A and B (Plenum 2000, 2001), and Green & Wuts,Protective Groups in Organic Synthesis 3rd Ed., (Wiley 1999) (all ofwhich are incorporated by reference for such disclosure). Generalmethods for the preparation of compound as described herein are modifiedby the use of appropriate reagents and conditions, for the introductionof the various moieties found in the formula as provided herein.

Compounds described herein are synthesized using any suitable proceduresstarting from compounds that are available from commercial sources, orare prepared using procedures described herein.

In certain embodiments, reactive functional groups, such as hydroxyl,amino, imino, thio or carboxy groups, are protected in order to avoidtheir unwanted participation in reactions. Protecting groups are used toblock some or all of the reactive moieties and prevent such groups fromparticipating in chemical reactions until the protective group isremoved. In other embodiments, each protective group is removable by adifferent means. Protective groups that are cleaved under totallydisparate reaction conditions fulfill the requirement of differentialremoval.

In certain embodiments, protective groups are removed by acid, base,reducing conditions (such as, for example, hydrogenolysis), and/oroxidative conditions. Groups such as trityl, dimethoxytrityl, acetal andt-butyldimethylsilyl are acid labile and are used to protect carboxy andhydroxy reactive moieties in the presence of amino groups protected withCbz groups, which are removable by hydrogenolysis, and Fmoc groups,which are base labile. Carboxylic acid and hydroxy reactive moieties areblocked with base labile groups such as, but not limited to, methyl,ethyl, and acetyl, in the presence of amines that are blocked with acidlabile groups, such as t-butyl carbamate, or with carbamates that areboth acid and base stable but hydrolytically removable.

In certain embodiments, carboxylic acid and hydroxy reactive moietiesare blocked with hydrolytically removable protective groups such as thebenzyl group, while amine groups capable of hydrogen bonding with acidsare blocked with base labile groups such as Fmoc. Carboxylic acidreactive moieties are protected by conversion to simple ester compoundsas exemplified herein, which include conversion to alkyl esters, or areblocked with oxidatively-removable protective groups such as2,4-dimethoxy benzyl, while co-existing amino groups are blocked withfluoride labile silyl carbamates.

Allyl blocking groups are useful in the presence of acid- andbase-protecting groups since the former are stable and are subsequentlyremoved by metal or pi-acid catalysts. For example, an allyl-blockedcarboxylic acid is deprotected with a palladium-catalyzed reaction inthe presence of acid labile t-butyl carbamate or base-labile acetateamine protecting groups. Yet another form of protecting group is a resinto which a compound or intermediate is attached. As long as the residueis attached to the resin, that functional group is blocked and does notreact. Once released from the resin, the functional group is availableto react.

Typically blocking/protecting groups may be selected from:

Other protecting groups, plus a detailed description of techniquesapplicable to the creation of protecting groups and their removal aredescribed in Greene & Wuts, Protective Groups in Organic Synthesis, 3rdEd., John Wiley & Sons, New York, N.Y., 1999, and Kocienski, ProtectiveGroups, Thieme Verlag, New York, N.Y., 1994, which are incorporatedherein by reference for such disclosure.

Methods

The invention includes a method of treating or preventing a disease ordisorder in a subject in need thereof. The method comprisesadministering to the subject a therapeutically effective amount of acompound of the invention. In certain embodiments, the disease ordisorder is selected from the group consisting of non-alcoholic fattyliver disease (NAFLD), type 2 diabetes (T2D), hypertriglyceridemia,obesity, metabolic syndrome, Rett's syndrome, metabolic syndromeassociated with aging, metabolic diseases associated with increasedreactive oxygen species (ROS), Friedreich's ataxia, and/or insulinresistance.

In certain embodiments of the invention, the effective amount of atherapeutic composition comprising a compound of the invention isgreater than about 0.01 mg/kg. In other embodiments, the effectiveamount of the administered compound is between about 0.01 mg/kg to about1000 mg/kg and any and all whole or partial increments therebetween,including about 0.1 mg/kg, about 1 mg/kg, about 0.01 mg/kg, about 0.1mg/kg, about 1 mg/kg, about 10 mg/kg, and about 100 mg/kg. In certainembodiments, the effective amount of the administered compound is about100 mg/kg. In certain embodiments, the effective amount of theadministered compound is about 50 mg/kg. In other embodiments, theeffective amount of the administered compound is about 5 mg/kg. In otherembodiments, the effective amount of the administered compound is about2.5 mg/kg.

In certain embodiments of the invention, the effective amount of atherapeutic composition comprising a compound of the invention isgreater than about 0.05 μmoles/kg. In other embodiments, the effectiveamount of the administered compound is between about 0.05 μmoles/kg toabout 5000 μmoles/kg and any and all whole or partial incrementstherebetween, including about 0.5 μmoles/kg, about 5 μmoles/kg, about0.05 μmoles/kg, about 0.5 μmoles/kg, about 5 μmoles/kg, about 50μmoles/kg, and about 500 μmoles/kg. In certain embodiments, theeffective amount of the administered compound is about 500 μmoles/kg. Incertain embodiments, the effective amount of the administered compoundis about 250 μmoles/kg. In other embodiments, the effective amount ofthe administered compound is about 25 μmoles/kg. In other embodiments,the effective amount of the administered compound is about 12.5μmoles/kg.

The invention also includes a method of increasing energy expenditure ina subject in need thereof, the method comprising administering to thesubject a therapeutically effective amount of at least one DNPderivative of the invention, whereby energy expenditure in the subjectis increased in the subject, wherein the composition is formulated forsustained release of the DNP derivative of the invention.

In certain embodiments, the method further comprises administering tothe subject an additional therapeutic agent useful in treating a diseaseor disorder. In certain embodiments, administering the compound of theinvention to the subject allows for administering a lower dose of theadditional therapeutic agent compared to the dose of the additionaltherapeutic agent alone that is required to achieve similar results intreating or preventing a disease or disorder in the subject. Forexample, in certain embodiments, the compound of the invention enhancesthe anti-disease or disorder activity of the additional therapeuticagent, thereby allowing for a lower dose of the therapeutic agent toprovide the same effect.

In certain embodiments, the compound of the invention and the additionaltherapeutic agent are co-administered to the subject. In otherembodiments, the compound of the invention and the additionaltherapeutic agent are co-formulated and co-administered to the subject.

In certain embodiments, the subject is a mammal. In other embodiments,the mammal is a human.

Combination Therapies

The compounds useful within the methods of the invention may be used incombination with one or more additional agents useful for treating adisease or disorder. These additional agents may comprise compounds thatare commercially available or synthetically accessible to those skilledin the art. These additional agents are known to treat, prevent, orreduce the symptoms of a disease or disorder.

In non-limiting examples, the compounds useful within the invention maybe used in combination with one or more of the following therapeuticagents:

Pulmonary Hypertension Drugs: ambrisentan, bosentan, treprostinil,sildenafil, epoprostenol, treprostenol, iloprost, aldosterone receptorantagonists like spironolactone and eplerenone, angiotensin-convertingenzyme inhibitors such as trandolapril, fosinopril, enalapril,captopril, ramipril, moexipril, lisinopril, quinapril, benazepril, andperindopril;

Angiotensin II Inhibitors: eprosartan, olmesmian, telmismian, losartan,valsmian, candesartan, and irbesmian, anti-anginal agents likenitroglycerin, isosorbide mononitrate, and isosorbide dinitrate,anti-arrhythmic agents including moricizine, quinidine, disopyramide,phenyloin, propafenone, flecamide, mexilitene, lidocaine, procainamide,propranolol, acebutolol, amiodarone, dofetilide, dronedarone, sotalol,ibutilide, diltiazem, verapamil, nifedipine, nimodipine, felodipine,nicardipine, clevidipine, isradipine, bepridil, nisoldipine, adenosine,and digoxin;

β-adrenergic Receptor Antagonists: betaxolol, bisoprolol, metoprolol,atenolol, nebivolol, nadolol, carvedilol, labetalol, timolol, carteolol,penbutolol, pindolol, and esmolol;

Anti-Diabetic Agents: insulin, GLP-1 agonists, DPP4 inhibitors, SGLT-2inhibitors, secretagogues such as sulfonylurea, tolbutamide,acetohexamide, tolazamide, chlorpropamide, glipizide, glyburide,glimepiride, glibenclamide, gliclazide, meglitinide such as nateglinide,senaglinide, repaglinide, insulin sensitizers such as biguanides,metformin, thiazolidinediones such as rosiglitazone, isaglitazone,darglitazone, englitazone, and pioglitazone;

α-Glucosidase Inhibitors: miglitol, voglibose, emiglitate, and acarbose;

Glucagon-Like Peptide Analogs and Agonists: exenatide, liraglutide, andtaspglutide, dipeptidyl peptidase-4 inhibitors like vildagliptin,sitagliptin, and saxagliptin;

Amylin Analogs: pramlintide;

Ligands or Agonists of Peroxisome Proliferator Activated Receptor(PPAR)-α, β, δ, and γ Cholesterol-Lowering Agents:hydroxymethylglutaryl-Coenzyme A (HMG-CoA) reductase inhibitors likestatins, such as, e.g., atorvastatin, fluvastatin, lovastatin,pitavastatin, pravastatin, rosuvastatin, and simvastatin;

Agonists of Retinoid X Receptors (RXR): ALRT-268, LG-1268, or LG-1069;glucokinase activators, inhibitors of hepatic enzymes involved instimulation of gluconeogenesis and/or glycogenolysis,

Diuretics: acetazolamide, dichlorphenamide, methazolamide, torsemide,furosemide, bumetanide, ethacrynic acid, amiloride, triamterene,indapamide, metolazone, methylclothiazide, hydrochlorothiazide,chlorothiazide, metolazone, bendroflumethiazide, polythiazide, andchlorthalidone;

Vasodilators: alprostadil, hydralazine, minoxidil, nesiritide, andnitroprusside;

Anti-Lipidemic Agents: cholestyramine, colestipol, clofibrate,gemfibrozil, probucol or dextrothyroxine.

Adipocytokines: leptin, adiponectin, and metreleptin;

Drugs for the treatment of Hyperlipidemia: fibrates, omega fatty acids,fish oil, statins.

A synergistic effect may be calculated, for example, using suitablemethods such as, for example, the Sigmoid-E_(max) equation (Holford &Scheiner, 1981, Clin. Pharmacokinet. 6:429-453), the equation of Loeweadditivity (Loewe & Muischnek, 1926, Arch. Exp. Pathol Pharmacol.114:313-326) and the median-effect equation (Chou & Talalay, 1984, Adv.Enzyme Regul. 22:27-55). Each equation referred to above may be appliedto experimental data to generate a corresponding graph to aid inassessing the effects of the drug combination. The corresponding graphsassociated with the equations referred to above are theconcentration-effect curve, isobologram curve and combination indexcurve, respectively.

Administration/Dosage/Formulations

A skilled artisan armed with the DNP derivatives of the invention wouldrecognize that the derivatives can be optimized for therapeutic outcomeby modulating the route of administration, dosage, and formulation bywhich the derivative is delivered to the subject in need thereof.

The regimen of administration may affect what constitutes an effectiveamount. The therapeutic formulations may be administered to the subjecteither prior to or after the onset of a disease or disorder. Further,several divided dosages, as well as staggered dosages may beadministered daily or sequentially, or the dose may be continuouslyinfused, or may be a bolus injection. Further, the dosages of thetherapeutic formulations may be proportionally increased or decreased asindicated by the exigencies of the therapeutic or prophylacticsituation.

Administration of the compositions of the invention to a patient,preferably a mammal, more preferably a human, may be carried out usingknown procedures, at dosages and for periods of time effective to treata disease or disorder in the patient. An effective amount of thetherapeutic compound necessary to achieve a therapeutic effect may varyaccording to factors such as the state of the disease or disorder in thepatient; the age, sex, and weight of the patient; and the ability of thetherapeutic compound to treat a disease or disorder in the patient.Dosage regimens may be adjusted to provide the optimum therapeuticresponse. For example, several divided doses may be administered dailyor the dose may be proportionally reduced as indicated by the exigenciesof the therapeutic situation. A non-limiting example of an effectivedose range for a therapeutic compound of the invention is from about 1and 5,000 mg/kg of body weight/per day. One of ordinary skill in the artwould be able to study the relevant factors and make the determinationregarding the effective amount of the therapeutic compound without undueexperimentation.

Actual dosage levels of the active ingredients in the pharmaceuticalcompositions of this invention may be varied so as to obtain an amountof the active ingredient that is effective to achieve the desiredtherapeutic response for a particular patient, composition, and mode ofadministration, without being toxic to the patient.

In particular, the selected dosage level depends upon a variety offactors including the activity of the particular compound employed, thetime of administration, the rate of excretion of the compound, theduration of the treatment, other drugs, compounds or materials used incombination with the compound, the age, sex, weight, condition, generalhealth and prior medical history of the patient being treated, and likefactors well, known in the medical arts.

A medical doctor, e.g., physician or veterinarian, having ordinary skillin the art may readily determine and prescribe the effective amount ofthe pharmaceutical composition required. For example, the physician orveterinarian could start doses of the compounds of the inventionemployed in the pharmaceutical composition at levels lower than thatrequired in order to achieve the desired therapeutic effect andgradually increase the dosage until the desired effect is achieved.

In particular embodiments, it is especially advantageous to formulatethe compound in dosage unit form for ease of administration anduniformity of dosage. Dosage unit form as used herein refers tophysically discrete units suited as unitary dosages for the patients tobe treated; each unit containing a predetermined quantity of therapeuticcompound calculated to produce the desired therapeutic effect inassociation with the required pharmaceutical vehicle. The dosage unitforms of the invention are dictated by and directly dependent on (a) theunique characteristics of the therapeutic compound and the particulartherapeutic effect to be achieved, and (b) the limitations inherent inthe art of compounding/formulating such a therapeutic compound for thetreatment of a disease or disorder in a patient.

In certain embodiments, the compositions of the invention are formulatedusing one or more pharmaceutically acceptable excipients or carriers. Incertain embodiments, the pharmaceutical compositions of the inventioncomprise a therapeutically effective amount of a compound of theinvention and a pharmaceutically acceptable carrier.

The carrier may be a solvent or dispersion medium containing, forexample, water, ethanol, polyol (for example, glycerol, propyleneglycol, and liquid polyethylene glycol, and the like), suitable mixturesthereof, and vegetable oils. The proper fluidity may be maintained, forexample, by the use of a coating such as lecithin, by the maintenance ofthe required particle size in the case of dispersion and by the use ofsurfactants. Prevention of the action of microorganisms may be achievedby various antibacterial and antifungal agents, for example, parabens,chlorobutanol, phenol, ascorbic acid, thimerosal, and the like. In manycases, it is preferable to include isotonic agents, for example, sugars,sodium chloride, or polyalcohols such as mannitol and sorbitol, in thecomposition. Prolonged absorption of the injectable compositions may bebrought about by including in the composition an agent which delaysabsorption, for example, aluminum monostearate or gelatin.

In certain embodiments, the compositions of the invention areadministered to the patient in dosages that range from one to five timesper day or more. In other embodiments, the compositions of the inventionare administered to the patient in range of dosages that include, butare not limited to, once every day, every two, days, every three days toonce a week, and once every two weeks. It is readily apparent to oneskilled in the art that the frequency of administration of the variouscombination compositions of the invention varies from individual toindividual depending on many factors including, but not limited to, age,disease or disorder to be treated, gender, overall health, and otherfactors. Thus, the invention should not be construed to be limited toany particular dosage regime and the precise dosage and composition tobe administered to any patient is determined by the attending physicaltaking all other factors about the patient into account.

Compounds of the invention for administration may be in the range offrom about 1 μg to about 10,000 mg, about 20 μg to about 9,500 mg, about40 μg to about 9,000 mg, about 75 μg to about 8,500 mg, about 150 μg toabout 7,500 mg, about 200 μg to about 7,000 mg, about 3050 μg to about6,000 mg, about 500 μg to about 5,000 mg, about 750 μg to about 4,000mg, about 1 mg to about 3,000 mg, about 10 mg to about 2,500 mg, about20 mg to about 2,000 mg, about 25 mg to about 1,500 mg, about 30 mg toabout 1,000 mg, about 40 mg to about 900 mg, about 50 mg to about 800mg, about 60 mg to about 750 mg, about 70 mg to about 600 mg, about 80mg to about 500 mg, and any and all whole or partial incrementstherebetween.

In some embodiments, the dose of a compound of the invention is fromabout 1 mg and about 2,500 mg. In some embodiments, a dose of a compoundof the invention used in compositions described herein is less thanabout 10,000 mg, or less than about 8,000 mg, or less than about 6,000mg, or less than about 5,000 mg, or less than about 3,000 mg, or lessthan about 2,000 mg, or less than about 1,000 mg, or less than about 500mg, or less than about 200 mg, or less than about 50 mg. Similarly, insome embodiments, a dose of a second compound as described herein isless than about 1,000 mg, or less than about 800 mg, or less than about600 mg, or less than about 500 mg, or less than about 400 mg, or lessthan about 300 mg, or less than about 200 mg, or less than about 100 mg,or less than about 50 mg, or less than about 40 mg, or less than about30 mg, or less than about 25 mg, or less than about 20 mg, or less thanabout 15 mg, or less than about 10 mg, or less than about 5 mg, or lessthan about 2 mg, or less than about 1 mg, or less than about 0.5 mg, andany and all whole or partial increments thereof.

In certain embodiments, the present invention is directed to a packagedpharmaceutical composition comprising a container holding atherapeutically effective amount of a compound of the invention, aloneor in combination with a second pharmaceutical agent; and instructionsfor using the compound to treat, prevent, or reduce one or more symptomsof a disease or disorder in a patient.

Formulations may be employed in admixtures with conventional excipients,i.e., pharmaceutically acceptable organic or inorganic carriersubstances suitable for oral, parenteral, nasal, intravenous,subcutaneous, enteral, or any other suitable mode of administration,known to the art. The pharmaceutical preparations may be sterilized andif desired mixed with auxiliary agents, e.g., lubricants, preservatives,stabilizers, wetting agents, emulsifiers, salts for influencing osmoticpressure buffers, coloring, flavoring and/or aromatic substances and thelike. They may also be combined where desired with other active agents,e.g., other analgesic agents.

Routes of administration of any of the compositions of the inventioninclude oral, nasal, rectal, intravaginal, parenteral, buccal,sublingual or topical. The compounds for use in the invention may beformulated for administration by any suitable route, such as for oral orparenteral, for example, transdermal, transmucosal (e.g., sublingual,lingual, (trans)buccal, (trans)urethral, vaginal (e.g., trans- andperivaginally), (intra)nasal and (trans)rectal), intravesical,intrapulmonary, intraduodenal, intragastrical, intrathecal,subcutaneous, intramuscular, intradermal, intra-arterial, intravenous,intrabronchial, inhalation, and topical administration.

Suitable compositions and dosage forms include, for example, tablets,capsules, caplets, pills, gel caps, troches, dispersions, suspensions,solutions, syrups, granules, beads, transdermal patches, gels, powders,pellets, magmas, lozenges, creams, pastes, plasters, lotions, discs,suppositories, liquid sprays for nasal or oral administration, drypowder or aerosolized formulations for inhalation, compositions andformulations for intravesical administration and the like. It should beunderstood that the formulations and compositions that would be usefulin the present invention are not limited to the particular formulationsand compositions that are described herein.

Oral Administration

For oral application, particularly suitable are tablets, dragees,liquids, drops, suppositories, or capsules, caplets and gelcaps. Thecompositions intended for oral use may be prepared according to anymethod known in the art and such compositions may contain one or moreagents selected from the group consisting of inert, non-toxicpharmaceutically excipients that are suitable for the manufacture oftablets. Such excipients include, for example an inert diluent such aslactose; granulating and disintegrating agents such as cornstarch;binding agents such as starch; and lubricating agents such as magnesiumstearate. The tablets may be uncoated or they may be coated by knowntechniques for elegance or to delay the release of the activeingredients. Formulations for oral use may also be presented as hardgelatin capsules wherein the active ingredient is mixed with an inertdiluent.

For oral administration, the compounds of the invention may be in theform of tablets or capsules prepared by conventional means withpharmaceutically acceptable excipients such as binding agents (e.g.,polyvinylpyrrolidone, hydroxypropylcellulose orhydroxypropylmethylcellulose); fillers (e.g., cornstarch, lactose,microcrystalline cellulose or calcium phosphate); lubricants (e.g.,magnesium stearate, talc, or silica); disintegrates (e.g., sodium starchglycollate); or wetting agents (e.g., sodium lauryl sulphate). Ifdesired, the tablets may be coated using suitable methods and coatingmaterials such as OPADRY™ film coating systems available from Colorcon,West Point, Pa. (e.g., OPADRY™ OY Type, OYC Type, Organic Enteric OY-PType, Aqueous Enteric OY-A Type, OY-PM Type and OPADRY™ White,32K18400). Liquid preparation for oral administration may be in the formof solutions, syrups or suspensions. The liquid preparations may beprepared by conventional means with pharmaceutically acceptableadditives such as suspending agents (e.g., sorbitol syrup, methylcellulose or hydrogenated edible fats); emulsifying agent (e.g.,lecithin or acacia); non-aqueous vehicles (e.g., almond oil, oily estersor ethyl alcohol); and preservatives (e.g., methyl or propyl p-hydroxybenzoates or sorbic acid).

Granulating techniques are well known in the pharmaceutical art formodifying starting powders or other particulate materials of an activeingredient. The powders are typically mixed with a binder material intolarger permanent free-flowing agglomerates or granules referred to as a“granulation.” For example, solvent-using “wet” granulation processesare generally characterized in that the powders are combined with abinder material and moistened with water or an organic solvent underconditions resulting in the formation of a wet granulated mass fromwhich the solvent must then be evaporated.

Melt granulation generally consists in the use of materials that aresolid or semi-solid at room temperature (i.e. having a relatively lowsoftening or melting point range) to promote granulation of powdered orother materials, essentially in the absence of added water or otherliquid solvents. The low melting solids, when heated to a temperature inthe melting point range, liquefy to act as a binder or granulatingmedium. The liquefied solid spreads itself over the surface of powderedmaterials with which it is contacted, and on cooling, forms a solidgranulated mass in which the initial materials are bound together. Theresulting melt granulation may then be provided to a tablet press or beencapsulated for preparing the oral dosage form. Melt granulationimproves the dissolution rate and bioavailability of an active (i.e.drug) by forming a solid dispersion or solid solution.

U.S. Pat. No. 5,169,645 discloses directly compressible wax-containinggranules having improved flow properties. The granules are obtained whenwaxes are admixed in the melt with certain flow improving additives,followed by cooling and granulation of the admixture. In certainembodiments, only the wax itself melts in the melt combination of thewax(es) and additives(s), and in other cases both the wax(es) and theadditives(s) melt.

The present invention also includes a multi-layer tablet comprising alayer providing for the delayed release of one or more compounds of theinvention, and a further layer providing for the immediate release of amedication for treatment of G-protein receptor-related diseases ordisorders. Using a wax/pH-sensitive polymer mix, a gastric insolublecomposition may be obtained in which the active ingredient is entrapped,ensuring its delayed release.

Parenteral Administration

For parenteral administration, the compounds of the invention may beformulated for injection or infusion, for example, intravenous,intramuscular or subcutaneous injection or infusion, or foradministration in a bolus dose and/or continuous infusion. Suspensions,solutions or emulsions in an oily or aqueous vehicle, optionallycontaining other formulatory agents such as suspending, stabilizingand/or dispersing agents may be used.

Additional Administration Forms

Additional dosage forms of this invention include dosage forms asdescribed in U.S. Pat. Nos. 6,340,475; 6,488,962; 6,451,808; 5,972,389;5,582,837; and 5,007,790. Additional dosage forms of this invention alsoinclude dosage forms as described in U.S. Patent Applications Nos.20030147952; 20030104062; 20030104053; 20030044466; 20030039688; and20020051820. Additional dosage forms of this invention also includedosage forms as described in PCT Applications Nos. WO 03/35041; WO03/35040; WO 03/35029; WO 03/35177; WO 03/35039; WO 02/96404; WO02/32416; WO 01/97783; WO 01/56544; WO 01/32217; WO 98/55107; WO98/11879; WO 97/47285; WO 93/18755; and WO 90/11757.

Dosing

The therapeutically effective amount or dose of a compound of theinvention depends on the age, sex and weight of the patient, the currentmedical condition of the patient and the progression of a disease ordisorder in the patient being treated. The skilled artisan is able todetermine appropriate dosages depending on these and other factors.

A suitable dose of a compound of the invention may be in the range offrom about 0.01 mg to about 5,000 mg per day, such as from about 0.1 mgto about 1,000 mg, for example, from about 1 mg to about 500 mg, such asabout 5 mg to about 250 mg per day. The dose may be administered in asingle dosage or in multiple dosages, for example from 1 to 4 or moretimes per day. When multiple dosages are used, the amount of each dosagemay be the same or different. For example, a dose of 1 mg per day may beadministered as two 0.5 mg doses, with about a 12-hour interval betweendoses.

It is understood that the amount of compound dosed per day may beadministered, in non-limiting examples, every day, every other day,every 2 days, every 3 days, every 4 days, or every 5 days. For example,with every other day administration, a 5 mg per day dose may beinitiated on Monday with a first subsequent 5 mg per day doseadministered on Wednesday, a second subsequent 5 mg per day doseadministered on Friday, and so on.

In the case wherein the patient's status does improve, upon the doctor'sdiscretion the administration of the inhibitor of the invention isoptionally given continuously; alternatively, the dose of drug beingadministered is temporarily reduced or temporarily suspended for acertain length of time (i.e., a “drug holiday”). The length of the drugholiday optionally varies between 2 days and 1 year, including by way ofexample only, 2 days, 3 days, 4 days, 5 days, 6 days, 7 days, 10 days,12 days, 15 days, 20 days, 28 days, 35 days, 50 days, 70 days, 100 days,120 days, 150 days, 180 days, 200 days, 250 days, 280 days, 300 days,320 days, 350 days, or 365 days. The dose reduction during a drugholiday includes from 10%-100%, including, by way of example only, 10%,15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%,85%, 90%, 95%, or 100%.

Once improvement of the patient's conditions has occurred, a maintenancedose is administered if necessary. Subsequently, the dosage or thefrequency of administration, or both, is reduced, as a function of theviral load, to a level at which the improved disease is retained. Incertain embodiments, patients require intermittent treatment on along-term basis upon any recurrence of symptoms and/or infection.

The compounds for use in the method of the invention may be formulatedin unit dosage form. The term “unit dosage form” refers to physicallydiscrete units suitable as unitary dosage for patients undergoingtreatment, with each unit containing a predetermined quantity of activematerial calculated to produce the desired therapeutic effect,optionally in association with a suitable pharmaceutical carrier. Theunit dosage form may be for a single daily dose or one of multiple dailydoses (e.g., about 1 to 4 or more times per day). When multiple dailydoses are used, the unit dosage form may be the same or different foreach dose.

Toxicity and therapeutic efficacy of such therapeutic regimens areoptionally determined in cell cultures or experimental animals,including, but not limited to, the determination of the LD₅₀ (the doselethal to 50% of the population) and the ED₅₀ (the dose therapeuticallyeffective in 50% of the population). The dose ratio between the toxicand therapeutic effects is the therapeutic index, which is expressed asthe ratio between LD₅₀ and ED₅₀. The data obtained from cell cultureassays and animal studies are optionally used in formulating a range ofdosage for use in human. The dosage of such compounds lies preferablywithin a range of circulating concentrations that include the ED₅₀ withminimal toxicity. The dosage optionally varies within this rangedepending upon the dosage form employed and the route of administrationutilized.

Those skilled in the art recognizes, or is able to ascertain using nomore than routine experimentation, numerous equivalents to the specificprocedures, embodiments, claims, and examples described herein. Suchequivalents were considered to be within the scope of this invention andcovered by the claims appended hereto. For example, it should beunderstood, that modifications in reaction conditions, including but notlimited to reaction times, reaction size/volume, and experimentalreagents, such as solvents, catalysts, pressures, atmosphericconditions, e.g., nitrogen atmosphere, and reducing/oxidizing agents,with art-recognized alternatives and using no more than routineexperimentation, are within the scope of the present application.

It is to be understood that wherever values and ranges are providedherein, all values and ranges encompassed by these values and ranges,are meant to be encompassed within the scope of the invention. Moreover,all values that fall within these ranges, as well as the upper or lowerlimits of a range of values, are also contemplated by the presentapplication.

The following examples further illustrate aspects of the invention.However, they are in no way a limitation of the teachings or disclosureof the invention as set forth herein.

EXPERIMENTAL EXAMPLES

The invention is further described in detail by reference to thefollowing experimental examples. These examples are provided forpurposes of illustration only, and are not intended to be limitingunless otherwise specified. Thus, the invention should in no way beconstrued as being limited to the following examples, but rather, shouldbe construed to encompass any and all variations which become evident asa result of the teaching provided herein.

Example 1: Reversal of Hypertriglyceridemia, Fatty Liver and InsulinResistance by a Novel Liver-Targeted Mitochondrial Uncoupler

Liver-targeted DNP derivatives that would be preferentially metabolizedby liver and converted to DNP were synthesized and screened. DNP-methylether (DNPME) was identified and examined further to determine if itcould safely decrease hypertriglyceridemia, NAFLD and insulin resistancewithout systemic toxicities. Treatment with DNPME both prevented andreversed hypertriglyceridemia, fatty liver and whole-body insulinresistance in high-fat fed rats and decreased hyperglycemia in a ratmodel of T2D with a clinically acceptable therapeutic index. Thereversal of liver and muscle insulin resistance could be attributed toreductions in tissue diacylglycerol content and reductions in PKCε andPKCθ activity in liver and muscle, respectively. These results describedherein demonstrate that the beneficial effects of DNP onhypertriglyceridemia, fatty liver and insulin resistance can bedissociated from systemic toxicities and are proof of concept fordeveloping liver-targeted mitochondrial uncoupling agents for thetreatment of the related epidemics of NAFLD, metabolic syndrome and type2 diabetes.

Materials and Methods

Screening of Compounds

To screen compounds, the ability of the compounds to raise oxygenconsumption rates in vivo was assessed using the Seahorse ExtracellularFlux Analyzer (Seahorse Bioscience, North Billerica, Mass.). Primaryhepatocytes were isolated (Neufeld, 1997, Methods. Mol. Biol.75:145-151) and plated on a collagen-coated 24-well plate (SeahorseBioscience, North Billerica, Mass.). After a 6-hour incubation period,cells were transferred to the Seahorse XF Analyzer for measurement ofoxygen consumption rate. Basal oxygen consumption was measured, thensequential additions of DNP (positive control) or the candidatecompounds raised the concentration of the putative uncoupler to 10, 100,500, or 1000 μM. Absolute oxygen consumption rates were normalized tothe oxygen consumption rate measured before the first addition ofuncoupler.

Animals

All animals were male. C57BL6J mice were ordered from JacksonLaboratories at 25 g. Sprague-Dawley and Zucker Diabetic Fatty ratsweighing 300-400 g were ordered from Charles River Laboratories. Allanimals were allowed to acclimate for 1-3 weeks before use. Unlessotherwise noted, animals were fed normal chow (Harlan 2018 [58% caloriesfrom carbohydrate, 24% from protein, 18% from fat], Harlan,Indianapolis, Ind.). Where specified, animals were fed safflower oilbased high fat diet (Dyets, Inc., Bethlehem, Pa.) with 60% calories fromfat. All animals had ad libitum access to water at all times. Wherespecified, caloric intake was enriched by free access to 5% sucrosewater. Rats used for experiments requiring blood collection underwentsurgery under isoflurane anesthesia to place catheters in the jugularvein and internal carotid artery. Another group of rats underwentsurgery to place catheters in the antrum of the stomach. All animalswere allowed to recover for at least 1 week before any furtherexperiments were performed.

Rats used for the studies to determine whether DNPME could prevent thedevelopment of NAFLD were fed high fat diet and sucrose water for 2weeks, during which time they were concurrently injected with daily 5mg/kg IP doses of DNPME in 100% DMSO (250 l/kg body weight) or vehicle.Rats used for the NAFLD reversal studies were fed high a fat diet andsucrose water for 1 week, then were given daily injections of DNPME orvehicle for 5 days while continuing the high fat diet and sucrose water.To measure caloric intake, the volume of water and weight of foodconsumed each day were measured, and calorie content was calculatedusing the known composition of each item.

To induce mild beta-cell defect and type 2 diabetes, rats were injectedwith 75 mg/kg nicotinamide and, following a 15 minute wait, the ratswere injected with 60 mg/kg streptozotocin. Animals were allowed torecover for 3 days, and those with random plasma glucose between 150 and350 mg/dl were used for further study. At this time, high fat diet andsucrose water feeding was initiated. After 3 days of feeding, two weeksof daily DNPME or vehicle injections were begun.

Toxicity Studies

For the acute toxicity studies, rats were treated with an IP injectionof DNPME in 100% DMSO at doses 1, 2.5, 5, 10, 25, 50, 100, and 200 mg/kgbody weight. Rectal temperature was measured with a microprobethermometer (Physitemp Instruments, Clifton, N.J.) at intervals up to 2hours after injection of the drug. Rectal temperature was measuredweekly in a separate group of rats injected daily with DNPME or vehiclefor 6 weeks. A separate group of rats were injected with increasingdoses of DNP or DNPME in 100% DMSO to determine the 50% lethal dose(LD₅₀). The 50% lethal dose was taken to be the dose at which 50% ofrats died within 24 hours of treatment.

To assess renal and hepatic toxicity, a group of catheterized rats wastreated with an intraperitoneal (IP) injection of DMSO vehicle or 1,2.5, 5, 10, 25 50, 100, or 200 mg/kg DNPME in DMSO daily. After fivedays, the rats were sacrificed and plasma obtained from the intravenouscatheter. The COBAS Mira Plus (Roche Diagnostics, Indianapolis, Ind.)was used to measure plasma alanine aminotransferase (ALT), aspartateaminotransferase (AST), and blood urea nitrogen (BUN). Plasma creatininewas measured by liquid chromatography/mass spectrometry/masssprectrometry (LC/MS/MS). 24 hour creatinine clearance was measured byhousing rats treated with DNPME or vehicle in metabolic cages for 24hours, collecting the urine, and measuring urine creatinineconcentration by LC/MS/MS.

Intragastric DNP Infusion

Rats underwent surgery to place catheters in the antrum of the stomach,the jugular vein and carotid artery. Following a week of recovery, theanimals were placed in a Covance infusion harness (Instech Solomon,Plymouth Meeting, Pa.) to protect the catheters, and DNP was infusedintragastrically at a rate of 2 mg/kg per day for 5 days. An equalvolume (2 ml/day) of DMSO vehicle was infused in controls. During thisperiod, rats had free access to safflower oil high fat diet and 5%sucrose water.

Histology Studies

Liver and kidney samples were prepared and stained with hematoxylin &eosin, and analyzed (Kleiner et al., 2005, Hepatology 41:1313-1321).

Glucose Tolerance Tests

Following an overnight fast, rats with a jugular venous line wereinjected with a 1 g/kg intraperitoneal bolus of 50% dextrose. Bloodsamples were taken through the venous line before and 5, 10, 20, 30, 45,60, and 90 min after the dextrose injection. Plasma glucose was measuredenzymatically on the YSI Life Sciences 2700 Select Biochemistry Analyzer(Yellow Springs, Ohio), and plasma insulin was measured byradioimmunoassay. Area under the curve was measured from time point A tosubsequent time point B according to the following formula:AUC_(A→B)=½(Plasma glc_(A)+Plasma glc_(B))×(Time_(B)−Time_(A))

The total area under the curve was calculated by adding the area underthe curve of each of the subsequent time periods. The insulin area underthe curve was calculated in the same way.

Basal and Insulin-Stimulated Glucose Turnover Studies

Hyperinsulinemic-englycemic clamps were performed and basal andinsulin-stimulated glucose turnover were measured using [6,6]²H glucose(Erion et al., 2013, Endocrinology 154:36-44). To measureinsulin-stimulated glucose uptake in heart and quadriceps muscle,[¹⁴C]2-deoxyglucose was injected at the conclusion of the clamp, andtissues processed (Samuel et al., 2007, J. Clin. Invest. 117:739-745).

Insulin Signaling

PKCε translocation in liver and PKCθ translocation in muscle from 6-hourfasted rats in the NAFLD treatment study were measured by Western blot(Choi et al., 2007, Proc. Natl. Acad. Sci. USA 104:16480-16485).

Lipid Concentration Assays

Triacylglycerol (TAG) in liver and quadriceps muscle were extracted(Bligh & Dyer, 1959, Can. J. Biochem. Physiol. 37:911-917) and measuredspectrophotometrically with Diagnostic Chemicals triglyceride reagent(Diagnostic Chemicals Ltd [DCL], Charlottetown, Canada). Liver andquadriceps diacylglycerol (DAG) were extracted by homogenization in abuffer containing 20 mM Tris-HCl, 1 mM EDTA, 0.25 mM EGTA, 250 mMsucrose, 2 mM phenylmethylsulfonyl fluoride, and a protease inhibitormixture (Roche, Indianapolis, Ind.). The cytosolic fragment was isolatedfrom the supernatant after high speed centrifugation for 1 hour.Diacylglycerol (DAG) and ceramide content was measured by liquidchromatography/mass spectrometry/mass spectrometry (Bligh & Dyer, 1959,Can. J. Biochem. Physiol. 37:911-917).

To measure liver triglyceride export, 300 mg/kg of a lipoprotein lipase(LPL) inhibitor, Poloxamer 407 (Sigma, St. Louis, Mo.) was injected, andplasma was sampled at time 0, 1, 2, 3, and 4 hours after treatment.Plasma triglyceride concentration was measured using the DCLtriglyceride reagent. Because LPL was assumed to be completely inhibitedby this dose of Poloxamer, triglyceride accumulation in plasma wasassumed to be proportional to hepatic triglyceride export. Thus, theslope of the least-squares regression of the graph of plasmatriglyceride concentration versus time (Microsoft Excel, Redmond, Wash.)was considered to be the TAG export rate. Tissue ceramide content wasmeasured by LC/MS/MS (Yu et al., 2002, J. Biol. Chem. 277:50230-50236).

Measurement of Liver Glycogen Content

Hepatic glycogen content was assessed by amyloglucosidase digestion(Passonneau & Lauderdale, 1974, Anal. Biochem. 60:405-412).

Assessment of Potential Gluconeogenic Markers

Plasma concentrations of twelve inflammatory markers were measured byELISA (QIAGEN, Valencia, Calif.). Adiponectin was measured by ELISA.Lactate was measured by COBAS, and FGF-21 by ELISA (Millipore).

Assessment of Whole Body Energy Metabolism

Mice were studied during daily IP injections of 5 mg/kg DNPME orvehicle. Comprehensive Animal Metabolic Monitoring System (ColumbusInstruments, Columbus, Ohio) was used to measure oxygen uptake andcarbon dioxide production, daily caloric intake and energy expenditure,respiratory exchange ratio, and activity throughout the day.

Evaluation of Hepatic Flux Rates in Rats

To measure liver-specific flux through the TCA cycle, a steady-stateinfusion of [3-¹³C] lactate (5 min prime 120 μmol/[kg-min], 115 mincontinuous infusion 40 μmol/[kg-min]) and [³H] glucose (44 μmol/min) wasperformed. At 120 min, plasma and livers were isolated, and hepaticfluxes were measured by nuclear magnetic resonance (NMR) and LC/MS/MS.

Measurement of Hepatic Positional Metabolite Enrichment

To measure total glutamate enrichment from livers of rats infused with[3-¹³C] lactate, ˜100 mg frozen liver were homogenized in 400 μLice-cold 50% acetonitrile. The samples were centrifuged at 10,000 g for10 min, and the supernatant was isolated. After overnight storage at 4°C., the samples were centrifuged at 10,000 g for 10 min through aNanosep 100 k Omega filter (Pall Life Sciences). The flow-through wasseparated on a hypercarb column (Thermo Scientific; 4.6×100 mm; 5 μmparticle size) before ionization for multiple reaction monitoringanalysis by LC/MS/MS (Applied Biosystems MDS SCIEX, 4000 Q-TRAP).

To measure positional glutamate and alanine enrichment, the liversamples were extracted for nuclear magnetic resonance (NMR)spectroscopy. ˜4-6 g ground liver were centrifuged in ˜30 mL 7%perchloric acid. The pH of the supernatant was adjusted to 6.5-7.5 using30% potassium hydroxide and 7% perchloric acid as needed, and theextract was dehydrated by lyophilizing for 2-3 days. The extract wasresuspended in 500 μL potassium phosphate buffer: 2.4 mM NaCOOH, 30 mMK₂HPO₄, 10 mM KH₂PO₄, 20 mM DMSO (internal standard) in 100% D₂O. ¹³CNMR spectra were collected using the AVANCE 500-MHz NMR spectrometer(Bruker Instruments).

Spectra were acquired with relaxation time=1 s, dummy scans=32, andnumber of scans=8,192 per block×3 blocks. Correction factors fordifferences in T₁ relaxation times were determined from fully relaxedspectra of natural abundance glutamate and glucose solutions. The totalglutamate enrichment by LC/MS/MS was divided algebraically according tothe peak areas of [¹³C] glutamate for each carbon corrected for T1relaxation times.

Total glucose enrichment in the NMR extract was determined byderivatizing 20 μL of the NMR extract with 100 μL methanol, then dryingovernight in a Speed-Vac. The extract was then resuspended in 75 μL 1:1acetic anhydride:pyridine and heated for 20 min at 65° C. The sample wascooled and quenched with 25 μL methanol. The total m+1 glucoseenrichment of each sample was measured by gas chromatography/massspectrometry (Shulman et al., 1985, J. Clin. Invest. 76:757-764). m+2,m+3, m+4, m+5, and m+6 enrichment were found to be negligible (<5% ofm+1 enrichment at steady-state). ¹³C NMR spectra were used to determinerelative concentrations of [¹³C] glucose. As for glutamate, the totalglucose enrichment by mass spectrometry was divided algebraically tomeasure the enrichment at each glucose carbon.

To measure positional alanine enrichment from [3-¹³C] lactate infusedrat livers, liver samples were extracted for NMR as described above, andthe enrichment at [2-¹³C] and [3-¹³C] alanine was measured byproton-observed, carbon-edited NMR (Alves et al., 2011, Hepatology53:1175-1181).

Measurement of Absolute Hepatic Flux Rates

Livers from rats infused with [3-¹³C] lactate and [³H] glucose wereextracted with perchloric acid (Alves et al., 2011, Hepatology53:1175-1181). Basal glucose turnover was measured (Maggs, 1998, Annalsof Internal Medicine 128:176-185); as these rats were overnight fastedwith low hepatic glycogen concentrations (FIG. 6P), all glucoseproduction was presumed to be from gluconeogenesis. It was assumed thatgluconeogenesis was 90% hepatic and 10% renal; from whole-bodygluconeogenesis data, the absolute hepatic gluconeogenesis could then becalculated. [3-¹³C] lactate infusion permitted the measuring of thepercent gluconeogenesis from pyruvate (flux through pyruvatecarboxylase, VPC) according to the following equation:

${{Gluconeogenesis}\mspace{14mu}{from}\mspace{14mu}{pyruvate}} = {\frac{\left\lbrack {1 - {\,^{13}C}} \right\rbrack + \left\lbrack {2 - {\,^{13}C}} \right\rbrack + {\left\lbrack {5 - {\,^{13}C}} \right\rbrack\mspace{14mu}{glucose}}}{\left\lbrack {2 - {\,^{13}C}} \right\rbrack + {\left\lbrack {3 - {\,^{13}C}} \right\rbrack\mspace{14mu}{glutamate}}}.}$

Flux could be expressed through PC relative to TCA cycle flux using thefollowing equation:Vana/Vtca=(C4*Glu−C2*Glu)/[(C2*Glu+C3*glu)−(C3*Pyr+C2*Pyr)]because the absolute V_(PC) had previously been calculated as describedabove, V_(TCA) could be back-calculated from these data. Finally, usingthe following equation:

${\frac{V_{PDH}}{V_{TCA}} = \frac{\left\lbrack {4 - {\,^{13}C}} \right\rbrack\mspace{14mu}{gluamate}}{\left\lbrack {3 - {{\,^{13}C}\mspace{14mu}{alaine}}} \right\rbrack}};$from the calculated V_(TCA), V_(PDH) could be determined using thisequation, and the contribution of fatty acid oxidation to the TCA cyclecould be determined as the difference between V_(TCA) and V_(PDH).Measurement of Plasma and Tissue DNP and DNPME Concentrations

LC/MS/MS method development and analysis were performed on the AppliedBiosystems 4000 QTRAP (Foster City, Calif.), equipped with a Shimadzuultrafast liquid chromatography (UFLC) system. Electrospray ionization(ESI) source with negative-ion detection was shown as the most sensitivefor both qualitative and quantitative analysis of DNP and DNPME. Thequantitative analysis of DNP was monitored in MRM mode with an ion pair(183.0/109.0). The preferred parameters are: curtain gas 25; collisiongas 9, probe temperature 480° C.; ion source gas 1 20; ion source gas 225; declustering potential (DP) −45 V; entrance potential (EP) −10 V;collision energy (CE) −35 V and collision cell exit potential −12 V.

The molecular radical anion of DNPME is unstable at the ionizationtemperature due to the labile methyl-oxygen ether bond, but thefragmented DNP anion is one of the most abundant peaks for DNPME usingthe parameters optimized for DNP, thus both DNP and DNPME can bequantitated by the same method. A Hibar LiChrosorb analytical HPLCcolumn (RP-C8, 4×125 mm, particle size 5 μM) (Merck KGaA, Darmstadt,Germany) was used to separate DNP and DNPME using an isocratic flow (250μl/min) of 15% 10 mM ammonium formate and 85% methanol/water (95/5). Theretention time was about 4 min for DNP, and about 7 min for DNPME.Deuterated 2,4-dinitrophenol (DNP-D₃) and deuterated DNP-methyl ether(DNPME-D₆) were used as the internal standards for DNP and DNPMEquantitation, respectively.

Extraction from Plasma Samples for LC/MS/MS Analysis

Plasma samples (10-100 μL) were mixed with 2.0 ml pre-chilledchloroform/methanol (v/v: 2/1) containing 0.01% BHT in 5 ml glass vials,to which was added 250 μl water together with 10 nmol DNP-D₃ and 10 nmolDNPME-D₆ as the internal standards. The mixtures were vortexed for 10seconds before centrifugation at 4,000 rpm for 10 min. The bottomorganic layer was carefully collected and dried with a steady stream ofnitrogen gas. The residual was reconstituted in 200 μl methanol forLC/MS/MS analysis for DNP and/or DNPME metabolites.

Extraction from Various Tissue Samples for LC/MS/MS Analysis

Frozen tissue samples (˜100 mg) were weighed and suspended in 2 mlmicrocentrifuge tubes with 1.6 ml pre-chilled chloroform/methanol (v/v:2/1) containing 0.01% BHT and one metal bead, and then added 10 nmolDNP-d₃ (Cambridge Isotopes, Andover, Mass.) and 10 nmol DNPME-d₆(synthesized as described above) as the internal standards. The tissuesamples were disrupted with Qiagen TissueLyser at 30 Hz for 15 min, andthen transferred into 5 ml glass vials, followed by addition of 0.5 mlchloroform and 250 μl water into each samples. The samples werecentrifuged at 4,000 rpm for 10 min after vortexed for 10 seconds. Thebottom organic layer was collected and dried with a gentle flow ofnitrogen. The residual was reconstituted in 200 μl methanol for LC/MS/MSanalysis of DNP and/or DNPME metabolites.

Kinetics Studies

To evaluate the kinetics of DNP and DNPME, a 5 mg/kg dose of DNPME wasinjected in six rats at time zero. Rats were sacrificed at 1, 2, 4, 6,12, and 24 hours to isolate the liver, and plasma was drawn through avenous catheter at each time point. Plasma and liver were isolated andimmediately frozen in liquid nitrogen. Plasma and liver concentrationsof DNP and DNPME were measured by LC/MS/MS.

To compare tissue concentrations of DNPME and DNP with various injectionprotocols, separate groups of rats (n=4 per group) were treated withDNPME or DNP as follows:

(i) 5 mg/kg DNPME, (ii) 5 mg/kg DNP, (iii) 25 mg/kg DNP

The DNPME injected rats were sacrificed 4 hours after the lastinjection, while the DNP injected rats were sacrificed 1 hour after thelast injection, times which in the previous kinetics studies had beendetermined to represent the peak plasma concentrations of DNP with therespective injections. Plasma and tissues (liver, heart, white adiposetissue, quadriceps, brain, and kidney) were isolated.

Mitochondrial Respiration Studies

Isolated mitochondria from liver and brain of overnight fasted rats wereprepared (Andrews et al., 2008, Nature 454:846-851). Tissues werehomogenized on ice in 10-20× volume of isolation buffer containing 215mM mannitol, 75 mM sucrose, 0.1% BSA, 1 mM EGTA, 20 mM HEPES at pH 7.2,and centrifuged for 10 min at 1000 g. The supernatant was then isolatedand centrifuged for 10 min at 8000 g. After the high-speedcentrifugation, the pellet was resuspended in BSA-free isolation bufferand washed by centrifugation. A Bradford assay was used to measure theprotein concentration of each mitochondrial sample. Samples were dilutedto 2 mg/ml with BSA free isolation buffer and stored on ice for furtherstudy. The Seahorse XF24 Analyzer (Seahorse Biosciences, NorthBillerica, Mass.) was used to measure mitochondrial respiration insamples plated at 10 μg/well in respiration buffer (215 mM mannitol, 75mM sucrose, 3 mM MgCl₂, 2.5 mM inorganic phosphates, 0.1% BSA, 25 mMMOPS, 10 mM pyruvate, 2.5 mM malate, 2.5 mM glutamate, 5 mM succinate, 2mM ADP, and 1 μg/ml oligomycin at pH 7.2). Oxygen consumption wasmeasured before and after the addition of DNP or DNPME (0, 3.125, 6.25,and 12.5 μM).

Measurement of Tissue Energetics

Livers from rats sacrifice by decapitation were isolated within 15seconds, and quadriceps muscle within 40 seconds. ˜50 mg of tissue werehomogenized in a buffer of 50% methanol, 10 μM EDTA, 2 mM ammoniumacetate, and 20 μM taurine-d₄. Following a 20 minute spin at 20,000 rcfand 4° C., the supernatant was kept on ice for 20 min, then spun againat 16,000 rcf in filter tubes for 5 min. The flow-through was separatedon a C18 5 μm 100 Å 4.6×100 mm column (Phenomenex, Torrance, Calif.)before ionization for multiple reaction monitoring (MRM) analysis byLC/MS/MS (Applied Biosystems/MDS SCIEX, 5000 Q-TRAP). Each analyte waseluted isocratically in 12 uM ammonium formate/5% methanol at a flowrate of 400 μl/min. Individual ion pairs were designated for eachanalyte, and the relative concentrations were determined by manualintegration.

Statistical Analysis

All data are expressed as mean±SEM. Significance was determined usingthe two-tailed unpaired Student's t-test. Differences with a P-valueless than 0.05 were considered significant.

Derivatives of DNP

It was hypothesized that a liver-targeted mitochondrial uncoupling agentmight be an effective and safe approach for the treatment of NAFLD andinsulin resistance by promoting the oxidation of hepatic triglyceride,while avoiding hyperthermia and associated systemic toxicities thattypically occur with classical mitochondrial uncoupling agents.

It was hypothesized that targeting DNP to the liver would reducehypertriglyceridemia, hepatic lipid content and improve insulinsensitivity without DNP-associated toxicities. Several derivatives ofDNP were synthesized, and it was hypothesized that these derivativeswould be preferentially taken up and metabolized in the liver by thecytochrome P-450 system. The derivatives were screened in isolatedhepatocytes for their ability to promote increased oxygen consumption(FIGS. 5A-5B).

From this screen two compounds which raised oxygen consumption rateswith similar potencies to DNP were identified (DNP-methyl ether (DNPME)and DNP-vinyl ether (DNPVE) (Ibrahim et al., 1986, Appl. Biochem.Biotechnol. 12:199-213; Stresser and Kupfer, 1998, Biochem. Pharmacol.55:1861-1871; Zamora et al., 2003, J. Med. Chem. 46:2313-2324).

DNPME In Vivo Metabolic Characterization Studies

DNPME was selected for further in vivo metabolic characterizationstudies due to its improved stability under acidic conditions. Incontrast to DNP, which caused a large, dose-dependent increase in rectaltemperatures and rapid dose-dependent mortality at doses above 10 mg/kg,DNPME caused no such effects after an injection up to 200 mg/kg (FIGS.1A-1D). Consistent with these findings, the LD₅₀ dose of DNPME wasalmost tenfold higher than that of DNP (FIG. 1E). Five days of dailytreatment with DNPME caused no appreciable hepatic or renal toxicity atdaily doses below 50 mg/kg (FIGS. 1F-1I), but daily doses above 2.5mg/kg were effective at reducing hepatic triglyceride accumulation inrats fed a high-fat diet and sucrose supplemented (5%) drinking water(FIG. 1J).

In contrast, the toxic threshold of chronic DNP treatment was determinedto be 1 mg/kg, whereas the lowest dose that was effective at loweringliver TAG was 5 mg/kg (FIGS. 5C-5G); thus the ratio of effective totoxic dose was 0.2 for DNP compared to 10 for DNPME. From these data itwas found that DNPME had a favorable therapeutic index (LD₅₀/ED₅₀) of70. The lowest effective daily dose of DNPME (5 mg/kg), which wastenfold lower than the minimal dose where any indication of hepatic orsystemic toxicities was observed, was selected to further characterizeits effects on hepatic steatosis and insulin action in vivo. Thistherapeutic index compares favorably with other drugs that are in commonuse such as acetaminophen, which has a LD₅₀/ED₅₀ of 13. Six weeks ofdaily treatment with DNPME at this dose caused no differences in liveror renal function tests, liver or renal histology, or rectal temperature(FIGS. 1K-1N, 5J-5K).

DNPME Studies in Rat Model of NAFLD

The striking safety and efficacy profiles of DNPME led to theexamination of whether DNPME treatment could reverse pre-existinghypertriglyceridemia, hepatic steatosis and insulin resistance in a ratmodel of NAFLD. To this end, hepatic steatosis was induced in rats byfeeding them a high fat diet with sucrose-supplemented drinking water.The rats were then treated with DNPME or vehicle daily for 5 days. Therats treated with DNPME had lower fasting plasma glucose, triglycerideand insulin concentrations compared to the vehicle treated animals(FIGS. 2A-2C), despite identical body weight at the time of study, andidentical food intake during the treatment period (FIGS. 6A-6B).Consistent with the reduced fasting plasma glucose and insulinconcentrations, DNPME-treated rats had a 20% reduction in basalendogenous glucose production (FIG. 2D). DNPME-treated rats were alsomuch more glucose tolerant as reflected by marked reductions in plasmaglucose and insulin concentrations in response to an intraperitonealglucose tolerance test (FIGS. 2E-F and 6C-6D).

DNPME-treated rats also manifested markedly increased whole body insulinresponsiveness as reflected by a greater than three-fold increase in theglucose infusion rate required to maintain euglycemia during thehyperinsulinemic-euglycemic clamp (FIGS. 2G and 6E-6G). Although notwishing to be bound by any particular theory, this increase in wholebody glucose insulin responsiveness in the DNPME-treated rats was likelyattributed to improvements in both hepatic and peripheral insulinsensitivity (FIGS. 2H-2I). The increased insulin-stimulated peripheralglucose metabolism was associated with a more than two-fold increase ininsulin-stimulated glucose uptake in skeletal muscle (FIG. 2J). Themarked improvement in hepatic and peripheral insulin sensitivity wasassociated with 40-50% reductions in liver and muscle TAG (FIGS. 2K-2L)and diacylglycerol (DAG) content (FIGS. 6H-6K). Consistent with thereduced liver and muscle DAG concentration, reduced protein kinase C(PKC)ε and PKCθ translocation were observed in liver and musclerespectively in DNPME-treated rats (FIGS. 6L-6M) (Griffin et al., 1999,Diabetes 48:1270-1274; Yu et al., 2002, J. Biol. Chem. 277:50230-50236,Samuel et al., 2004, J. Biol. Chem. 279:32345-32353; Samuel et al.,2007, J. Clin. Invest. 117:739-745). In contrast there were no observeddifferences in liver or muscle ceramide content or alterations in plasmapro-gluconeogenic inflammatory cytokine, adiponectin, FGF-21, or lactateconcentration in the DNPME control animals despite this markedimprovement in insulin sensitivity (FIGS. 6N-6T). The reduced liverlipid content was associated with a 50% reduction in liver TAG export(FIG. 2M), highlighting a causal role for NAFLD in the development ofwhole-body insulin resistance, and the potential to treat liver andmuscle insulin resistance by promoting increased hepatic fat oxidation.

In order to determine if DNPME reduced hepatic lipid content and VLDLproduction by promoting increased hepatic mitochondrial uncoupling invivo, liver-specific rates of oxidative flux pathways were measured, anda 50% increase in rates of hepatic TCA flux was observed (FIG. 2N).Consistent with the reduced basal glucose production and fasting plasmaglucose concentrations measured in DNPME treated rats, these animalsalso exhibited a 30% reduction in hepatic pyruvate carboxylase flux(FIG. 2O).

DNPME Studies in Rat Model of Type II Diabetes

Given the profound effects of DNPME to reduce ectopic lipid content inliver and skeletal muscle and improve whole body insulin sensitivity inboth the NAFLD prevention and reversal studies, it was examined whetherDNPME treatment would improve fasting and postprandial plasma glucoseand insulin profiles in a rat model of T2D. The effect of 14 days ofDNPME vs. vehicle treatment in a well-established rat model of T2D wasexamined (Masiello et al., 1998, Diabetes 47:224-229; Reed et al., 2000,Metab. Clin. Exp. 49:1390-1394; Samuel et al., 2009, Proc. Natl. Acad.Sci. USA 106:12121-12126; Samuel et al., 2004, J. Biol. Chem.279:32345-32353).

Despite having no difference in body weight or white adipose tissueweight, and consistent with a primarily hepatic uncoupling effect andunchanged whole-body metabolism, DNPME treatment normalized fastingplasma glucose and triglyceride concentrations (FIGS. 3A-3C). DNPMEtreatment also resulted in a marked improvement in glucose tolerance,reflecting improved whole-body insulin sensitivity (FIGS. 3D-3E, 7C-7D).Finally, and consistent with the results in the other insulin resistantrodent models of NAFLD, DNPME treatment caused a marked reduction inboth liver and muscle TAG content (FIGS. 3F-3G) without any indicationof renal or hepatic histopathology (FIGS. 5E-5F). To further test thehypothesis that DNPME treatment ameliorates hyperglycemia in a rat modelof chronic type 2 diabetes, 5 day treatment studies on Zucker DiabeticFatty (ZDF) rats concurrently fed high fat diet and sucrose water wereperformed. Similar to the results in the T2D model previously describedelsewhere herein, DNPME treatment resulted in reductions in fastingplasma glucose, insulin and liver triglyceride concentrations with noindication of liver or renal dysfunction (FIGS. 7G-7O).

Metabolic Cage Studies

In order to examine the impact of DNPME on whole body energy expenditureand other metabolic parameters, metabolic cage (CLAMS) studies wereperformed in DNPME and vehicle treated mice. No effects of DNPME (5mg/kg per day) were observed on whole body oxygen consumption, carbondioxide production, energy expenditure, respiratory quotient, oractivity (FIGS. 8A-8E). Consistent with the rat studies, no effect ofDNPME was observed on food intake (FIG. 8F). Although not wishing to bebound by any particular theory, when taken together these data suggestthat DNPME at a dose of 5 mg/kg per day promotes subtle increases inhepatic energy uncoupling that can result in major reductions in liverand muscle fat content with associated reversal of liver and muscleinsulin resistance without a major impact on whole body energyexpenditure.

DNPME does not Alter the Intracellular Energy Charge or Activate AMPK

It was also hypothesized that low circulating levels of DNP, derivedfrom hepatic conversion of DNPME to DNP by the P450 system, promotes lowlevels of mitochondrial uncoupling in muscle and other extra-hepaticorgans. In order to examine this hypothesis, mitochondrial uncouplingwas assessed in vitro and uncoupling of liver but not brain by DNPME wasobserved, whereas DNP uncoupled both tissues in isolated mitochondria.In contrast, neither DNP nor DNPME was found to uncouple whole-cellbrain preparations and similarly uncoupled skeletal or cardiac muscle orkidney at the plasma concentrations measured in the in vivo animal DNPMEtreatment studies (FIGS. 8G-8K). These data indicate that at the dose ofDNPME administered in vivo, the uncoupling effect of DNPME appears to berestricted to the liver and can be mostly attributed to local conversionof DNPME to DNP (FIGS. 8G-8J). In addition, no differences were observedin ATP/AMP, ATP/ADP or NADH/NAD⁺ ratios in liver and skeletal muscle, orin phosphorylation of hepatic AMP-activated protein kinase (AMPK) or itsdownstream target acetyl CoA carboxylase (ACC), demonstrating that DNPMEis not altering the intracellular energy charge in these tissues at thistherapeutic dose (FIGS. 8L-8R).

Low Intracellular Concentrations of DNP May be Sufficient to AchieveSignificant Liver Mitochondrial Uncoupling

In order to gain further insights into why DNPME does not result inhyperthermia at similar doses as DNP, plasma and tissue levels of DNPand DNPME were measured by LC-MS/MS. Dosing rats with DNPME at 5 mg/kgby intraperitoneal injection resulted in peak plasma DNP concentrationsof ˜5 μM and peak liver DNP concentrations of ˜8 μM (FIGS. 4A-4B). DNPconcentrations in all tissues were below 10 μM, while DNPME accumulatedin WAT but not any other tissue (FIGS. 4C-4D). In contrast, the samedose of DNP (5 mg/kg) resulted in a peak plasma DNP concentration of˜120 μM and peak DNP liver concentrations of ˜60 μM (FIG. 4E).

In order to determine how these plasma concentrations of DNP comparewith toxic levels of DNP, plasma and liver concentrations of DNP wereexamined at the lowest dose of DNP (25 mg/kg) where systemic toxicitiesmay be observed, and peak plasma DNP concentrations were found to be˜380 μM (FIGS. 4F-4G). Importantly, a week of treatment with DNPMEresulted in tissue DNP and DNPME concentrations similar to thosefollowing a one-time DNPME injection (FIGS. 4H-4I). Although not wishingto be bound by any particular theory, these data suggest that very lowintracellular concentrations of DNP, which are more than 75 fold lowerthan toxic levels of DNP (380 μM) are sufficient to achieve significantliver mitochondrial uncoupling, resulting in reductions in ectopic lipidcontent and hepatic triglyceride export as well as reversing liver andmuscle insulin resistance, without resulting in hyperthermia andassociated systemic toxicities.

Example 2: General Experimental Procedures for Chemical Synthesis

Chemicals were obtained from commercial sources and used as received,unless noted otherwise. In particular, 2,4-dinitrophenol (DNP;compound 1) was purchased from MP Biomedicals, 2,4-dinitrophenyl methylether (DNPME; compound 2) from Alfa Aesar, and1-chloro-2,4-dinitrobenzene-d3 (compound 3) from C/D/N Isotopes.

NMR Spectra were measured at ambient temperature unless otherwise noted.¹H NMR spectra were recorded on either a 500 or 400 MHz Brukerspectrometer. Chemical shifts are reported in ppm (δ) relative totetramethylsilane, using the solvent as a reference (CDCl₃=7.26 ppm).The following is an example data point: chemical shift (multiplicity[s=singlet, d=doublet, t=triplet, q=quartet, m=multiplet, br=broad, andcombinations thereof], coupling constants [Hz], integration). ¹³C NMRspectra were recorded on a 500 MHz (126 MHz) or 400 MHz (101 MHz) Brukerspectrometer with complete proton decoupling. Chemical shifts arereported in ppm (δ) relative to tetramethylsilane using the solvent as areference (CDCl₃=77.16 ppm). MS data were obtained with an Agilent6890/5973 GC/MSD System. Yield refers to isolated material.

Synthesis of 2,4-dinitrophenyl Boronic Acid (DNPBA; Compound 4)

DNPBA (compound 4) was synthesized (Collibee and Yu, 2005, Tet. Lett.47:4453-4455).

Synthesis of 2,4-dinitrophenyl Methyl Ether (DNPME; Compound 2)

DNMPE (compound 2) was synthesized using previously described methodswith minor modifications (Gong et al., 2002, Dyes and Pigments53:109-117). Briefly, aryl chloride 5 (4.05 g; 20 mmol) was dissolved inMeOH/THF (3.2 ml/2 ml), treated with K₂CO₃ (4.70 g; 34 mmol) and heatedat 65° C. for 3 h in a sealed tube. The reaction mixture was thendiluted with dichloromethane (50 ml) and washed twice with 3% NaHCO₃solution. The organic layers were combined, dried over Na₂SO₄ andconcentrated to afford pure DNMPE as a pale yellow solid (3.25 g; 82%).¹H NMR (400 MHz, CDCl₃) δ 8.74 (d, J=2.8, 1H), 8.45 (dd, J=9.3, 2.8,1H), 7.24 (d, J=9.2, 1H), 4.10 (s, 3H); ¹³C NMR (101 MHz, CDCl₃) δ157.43, 140.27, 138.95, 129.29, 122.02, 113.78, 57.62; IR (film, cm⁻¹)3101, 1598, 1520, 1342, 1279; MS (e.i.) m/z 198 [M⁺, 42%].

Synthesis of 2,4-dinitrophenyl Vinyl Ether (DNPVE; Compound 6)

DNPVE was prepared from 2,4-dinitrophenol (1, 184 mg; 1 mmol) (Blouinand Frenette, 2001, J. Org. Chem. 66:9043-9045). After SiO₂chromatography (10-30% EtOAc/hexane), DNPVE was obtained as a paleyellow gum (9 mg; 4%). ¹H NMR (400 MHz, CDCl₃) δ 8.80 (d, J=2.7, 1H),8.44 (dd, J=9.2, 2.8, 1H), 7.33 (d, J=9.2, 1H), 6.68 (dd, J=13.5, 5.9,1H), 5.18 (dd, J=13.4, 2.6, 1H), 4.93 (dd, J=5.8, 2.5, 1H); ¹³C NMR (101MHz, CDCl₃) δ 154.44, 145.03, 141.93, 139.38, 129.07, 122.18, 117.75,102.77; IR (film, cm⁻¹) 1600, 1527, 1338, 1264; MS (e.i.) m/z 180[(M−NO)⁺, 7%].

Synthesis of 2,4-dinitrophenyl Allyl Ether (DNPAE; Compound 7)

DNPAE (compound 7) was synthesized from aryl chloride 5 (4.05 g; 20mmol), using the same method as described above for the synthesis ofDNPME (compound 2), except substituting allyl alcohol (5.4 ml) forMeOH/THF. DNPAE was obtained as a yellow solid (3.297 g; 74%). ¹H NMR(400 MHz, CDCl₃) δ 8.72 (d, J=2.8, 1H), 8.40 (dd, J=9.2, 2.8, 1H), 7.22(d, J=9.2, 1H), 6.03 (ddt, J=17.3, 10.3, 5.0, 1H), 5.51 (dq, J=17.3,1.6, 1H), 5.40 (dq, J=10.7, 1.4, 1H), 4.83 (dt, J=5.0, 1.6, 2H); ¹³C NMR(101 MHz, CDCl₃) δ 156.41, 140.19, 139.09, 130.41, 129.09, 121.97,119.64, 114.92, 71.02; IR (film, cm⁻¹) 1604, 1521, 1488, 1340, 1313,1279, 1242; MS (e.i.) m/z 224 [M⁺, 3%].

Synthesis of 2,4-dinitrophenyl Isopropyl Ether (DNPIE; Compound 8)

DNPIE (compound 8) was synthesized from aryl chloride 5 (1.02 g; 5mmol), using the same method as described above for the synthesis ofDNPME (compound 2), except substituting i-PrOH (1.5 ml) for MeOH/THF.DNPIE was obtained as a yellow solid (542 mg; 48%). ¹H NMR (500 MHz,CDCl₃) δ 8.67 (d, J=2.8, 1H), 8.39 (dd, J=9.3, 2.8, 1H), 7.19 (d, J=9.4,1H), 4.85 (hept, J=6.0, 1H), 1.46 (d, J=6.0, 6H); ¹³C NMR (126 MHz,CDCl₃) δ 156.05, 139.87, 139.71, 128.82, 121.93, 115.17, 74.32, 21.77;IR (film, cm⁻¹) 1604, 1521, 1486, 1340, 1311, 1282; MS (e.i.) m/z 226[M⁺, 3%].

Synthesis of 2,4-dinitrophenyl Methyl Ether-d6 (DNPME-d₆; Compound 9)

DNPME-d₆ (compound 9) was synthesized using the same method as describedabove for DNPME (compound 2) with minor modifications. 3 Å molecularsieves and K₂CO₃ (92 mg; 0.66 mmol) were added to a microwave vessel andflame-dried. To this were added aryl chloride 3 (80 mg; 0.39 mmol) andCD₃OD (0.6 ml). The reaction mixture was heated at 65° C. for 4 h in amicrowave. The crude product was purified as described above for DNPMEto afford DNPME-d6 (74 mg; 93%). ¹³C NMR (126 MHz, CDCl₃) δ 157.44,140.01, 138.71, 128.96 (t, J=26.0), 121.68 (t, J=26.2), 113.52 (t,J=25.5), 56.84 (hept, J=22.3); IR (film, cm⁻¹) 2308, 1579, 1518, 1425,1372, 1336, 1305, 1248; MS (e.i.) m/z 204 [M⁺, 20%].

The disclosures of each and every patent, patent application, andpublication cited herein are hereby incorporated herein by reference intheir entirety. While this invention has been disclosed with referenceto specific embodiments, it is apparent that other embodiments andvariations of this invention may be devised by others skilled in the artwithout departing from the true spirit and scope of the invention. Theappended claims are intended to be construed to include all suchembodiments and equivalent variations.

What is claimed is:
 1. A method of ameliorating a disease or disorder ina subject in need thereof, wherein the disease or disorder is at leastone selected from the group consisting of hypertriglyceridemia, fattyliver, and insulin resistance, the method comprising: administering tothe subject a therapeutically effective amount of a nitrophenylderivative selected from the group consisting of 2,4-dinitrophenyl vinylether, 2,4-dinitrophenyl methyl ether-d₆, and solvates thereof.
 2. Themethod of claim 1, wherein the method further comprises administering tothe subject at least one additional therapeutic agent.
 3. The method ofclaim 2, wherein the nitrophenyl derivative and the at least oneadditional therapeutic agent are co-administered to the subject.
 4. Themethod of claim 3, wherein the nitrophenyl derivative and the at leastone additional therapeutic agent are co-formulated.
 5. The method ofclaim 1, wherein the subject is a mammal.
 6. The method of claim 5,wherein the mammal is human.
 7. The method of claim 1, wherein theadministering is by an administration route selected from the groupconsisting of oral, transdermal, transmucosal, intravesical,intrapulmonary, intraduodenal, intragastrical, intrathecal,subcutaneous, intramuscular, intradermal, intra-arterial, intravenous,intrabronchial, inhalation, and topical.
 8. The method of claim 7,wherein the administering is oral and wherein the nitrophenyl derivativeis formulated as a tablets, dragee, liquid, drop, capsule, caplet, orgelcap.
 9. A method of increasing energy expenditure in a subjectafflicted with at least one disease or disorder selected from the groupconsisting of non-alcoholic fatty liver disease (NAFLD), non-alcoholicsteatohepatitis (NASH), hepatic steatosis, type 2 diabetes (T2D),acquired lipodystrophy, lipodystrophy (inherited), partiallipodystrophy, hypertriglyceridemia, obesity, metabolic syndrome, Rett'ssyndrome, Friedreich's ataxia, and insulin resistance, the methodcomprising: administering to the subject a therapeutically effectiveamount of a nitrophenyl derivative selected from the group consisting of2,4-dinitrophenyl vinyl ether, 2,4-dinitrophenyl methyl ether-d₆, andsolvates thereof, whereby energy expenditure in the subject isincreased.
 10. The method of claim 9, wherein the therapeuticallyeffective amount of the nitrophenyl derivative is about 25 μmoles/kg.11. The method of claim 9, wherein the subject is a mammal.
 12. Themethod of claim 11, wherein the mammal is human.
 13. The method of claim9, wherein the administering is by an administration route selected fromthe group consisting of oral, transdermal, transmucosal, intravesical,intrapulmonary, intraduodenal, intragastrical, intrathecal,subcutaneous, intramuscular, intradermal, intra-arterial, intravenous,intrabronchial, inhalation, and topical.
 14. The method of claim 13,wherein the administering is oral and wherein the nitrophenyl derivativeis formulated as a tablets, dragee, liquid, drop, capsule, caplet, orgelcap.
 15. A method of uncoupling mitochondria in the liver of asubject, the method comprising: administering to the subject atherapeutically effective amount of a nitrophenyl derivative selectedfrom the group consisting of 2,4-dinitrophenyl methyl ether,2,4-dinitrophenyl vinyl ether, 2,4-dinitrophenyl methyl ether-d₆, andsolvates thereof, wherein mitochondria in the liver of the subject areselectively uncoupled.
 16. The method of claim 15, wherein the subjectis a mammal.
 17. The method of claim 15, wherein the mammal is human.18. The method of claim 15, wherein the administering is by anadministration route selected from the group consisting of oral,transdermal, transmucosal, intravesical, intrapulmonary, intraduodenal,intragastrical, intrathecal, subcutaneous, intramuscular, intradermal,intra-arterial, intravenous, intrabronchial, inhalation, and topical.19. The method of claim 18, wherein the administering is oral andwherein the nitrophenyl derivative is formulated as a tablets, dragee,liquid, drop, capsule, caplet, or gelcap.
 20. The method of claim 15,wherein the nitrophenyl derivative is administered in an amount of about0.1 mg to about 1000 mg to the subject.